Query= MSMg01no319_p07.b1 MSMg01no319_p07.b1 CHROMAT_FILE:
MSMg01no319_p07.b1 PHD_FILE: MSMg01no319_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:22 2005
(374 letters)
>mm_chr2_60656154_60656927
Length = 774
Score = 654 bits (338), Expect = 0.0
Identities = 361/370 (97%), Gaps = 4/370 (1%)
Strand = Plus / Plus
Query: 5 gaattccttcagttt--tcccaaaaagctacattaagtaacgtagttgtaaaaacacatg 62
||||||||||||| | || | |||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccttcagtatcatc--agaaagctacattaagtaacgtagttgtaaaaacacatg 262
Query: 63 actagattagaagcaaacatctaaccttagatactgctttacaatgacgtatccacacca 122
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct: 263 actagattagaagcaaaaatctaaccttagatactgctttacaatgacgtatccacgcca 322
Query: 123 aatatttttacatccaaaatagtggatgcaaactaaaagggaaaccaaatttggggataa 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aatatttttacatccaaaatagtggatgcaaactaaaagggaaaccaaatttggggataa 382
Query: 183 aattctatggccattttagtgtaagccttgctggttcaatttacaacagaatagcacagc 242
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aattctatggccattttagtataagccttgctggttcaatttacaacagaatagcacagc 442
Query: 243 tcaaatgccccactcctccctaattaggcacagtccttttgagatgtctgtccctaagaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcaaatgccccactcctccctaattaggcacagtccttttgagatgtctgtccctaagaa 502
Query: 303 caaggcgagtatcctcaggtaatatctaattagcatgtctctttttgtggcagtttaatg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 caaggcgagtatcctcaggtaatatctaattagcatgtctctttttgtggcagtttaatg 562
Query: 363 ggacttttgc 372
||||||||||
Sbjct: 563 ggacttttgc 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 374
Length of database: 774
Length adjustment: 9
Effective length of query: 365
Effective length of database: 765
Effective search space: 279225
Effective search space used: 279225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no319_p07.g1 MSMg01no319_p07.g1 CHROMAT_FILE:
MSMg01no319_p07.g1 PHD_FILE: MSMg01no319_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:22 2005
(342 letters)
>mm_chr2_60809817_60810558
Length = 742
Score = 638 bits (330), Expect = 0.0
Identities = 339/342 (99%)
Strand = Plus / Minus
Query: 1 agccctctagacagatttacaatcttgcttatgctccaatatccattacagggagagggc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 542 agccctctagacagatttacaatcttgcttatgctccaatatccattagagggagagggc 483
Query: 61 cacagacatggaaaggttcatgcaatcctaagaacataatttgatggagaataatatccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cacagacatggaaaggttcatgcaatcctaagaacataatttgatggagaataatatccc 423
Query: 121 ctgaggtgcaggtgaacagcttagcatcgttctaatggaaagccaccacactggggtgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 ctgaggtgcaggtgaacagcttagcatcgttctaatggaaagccaccacactggggtgaa 363
Query: 181 ttttagggtcccactgttgttcagtatctcctttcagtgttgaaatgaaattgggaaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ttttagggtcccactgttgttcagtatctcctttcagtgttgaaatgaaattgggaaagt 303
Query: 241 tctcaattctgttaagatagaaaatatgacatgattatttatgcttattacacagagagg 300
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tctcaattctgggaagatagaaaatatgacatgattatttatgcttattacacagagagg 243
Query: 301 aaatttaaagtgttcttagagacatatgtggaacaaagcatt 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aaatttaaagtgttcttagagacatatgtggaacaaagcatt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
