Query= MSMg01no320_f05.b1 MSMg01no320_f05.b1 CHROMAT_FILE:
MSMg01no320_f05.b1 PHD_FILE: MSMg01no320_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:49 2005
(184 letters)
>mm_chr2_157899220_157899805
Length = 586
Score = 346 bits (179), Expect = e-100
Identities = 183/185 (98%), Gaps = 2/185 (1%)
Strand = Plus / Plus
Query: 2 ccctggcctctgcatcttcccagtgctttgggtgcacacctttaggaaagtctacgcagc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ccctggcctctgcatcttcccagtgctttgggtgcacacctttaggaaagtctacgcagc 261
Query: 62 gtgggttgggccttgaaaacctccttgtccttacaaaatgtttggggggg--tgggggta 119
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 262 gtgggttgggccttgaaaacctccttgtccttacaaaatgtttgggggggggtgggggta 321
Query: 120 agcctctagtgtttctaagcctcagacctcacatagcccagtgttttctcatacagattt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 agcctctagtgtttctaagcctcagacctcacatagcccagtgttttctcatacagattt 381
Query: 180 attag 184
|||||
Sbjct: 382 attag 386
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 586
Length adjustment: 8
Effective length of query: 176
Effective length of database: 578
Effective search space: 101728
Effective search space used: 101728
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no320_f05.g1 MSMg01no320_f05.g1 CHROMAT_FILE:
MSMg01no320_f05.g1 PHD_FILE: MSMg01no320_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:49 2005
(129 letters)
>mm_chr2_158065222_158065750
Length = 529
Score = 242 bits (125), Expect = 7e-69
Identities = 128/129 (99%)
Strand = Plus / Minus
Query: 1 cccatcctacaaggcacagcatggacagcatcagtcccactttcaacgctacagggaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 cccatcctacaaggcacagcatggacagcatcagtcccactttcaacgctacagggaaga 270
Query: 61 ggtctggggtgtctggcgtggttctagagccataccctctccactataatgtccttcaat 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ggtctggggtgtctggggtggttctagagccataccctctccactataatgtccttcaat 210
Query: 121 cccacgaag 129
|||||||||
Sbjct: 209 cccacgaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 129
Length of database: 529
Length adjustment: 8
Effective length of query: 121
Effective length of database: 521
Effective search space: 63041
Effective search space used: 63041
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
