CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAATGAGAGTATTACGCCCCCTAAGGACTCCTTCCCAATAAGCAGGGT
CAAACAGTCTGGCCAGCATAAAGCTGGGAAATGAGTCACCCGGTGTCAGG
GAGGATTCTGGTATAATTTACTCTGCAAGAAGGTTATCCTTCAAAAGCAG
GTCTCCTTTTTTCTTTGTGTTCACCAGAAAGAAAGTGGGGAGGTTGAGAG
TTGTCAGAGTGTCCCCGGTGTGCCAGGGCTTTTAGTGGGGTTCTGACTCT
GAGACAAAATACCTCCCTACCTGGAATGGAGGATCTAATTTCATTTTCTG
CTGGTCTGACATGACCTGTAGTCTGAAGCCAGACAACCCAGACCTCTTCA
AAACTCTTCTCCAGCAGATAACACCGCCTCTCATCTCTTTGCTTGTTAAC
AATCCATTTGAGTTCAACAGCAGGGAATGCTGGTGGGCATTTGAAACAAG
AAGAAAAAAAATTCAGCAAGAGAAAAGGAAACAGATAAAAAGCAGTACTG
TAAGAAAGGAACAAGTAGAGTTGGAGTTATGACTGTGGATTGGGGTGATG
AGGTTAGCAATTGAACTTTCAAGGAATATTGCATGTAATTTTACTTTTGA
AGTAGAATAGAAATGATAAAGCATGACTAGAAATATACAAAACAGGAATG
CCATGCAGTTGAAAATAATAGTCTTCAGAAATTATTAG

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGAGCCCCATTTT
TAAGCAGTTATTTGATTTTCTGGAGCCCACCTTCATGATATATATATATA
TATATATATATATATATATATATATATATATATATATATATGAGATTATT
GGTATATATGTAGATATAGAGAGATATAAAGGGGAGTGGGAGTGAGAGTG
AGGGTGATGGTGAGAGAGGGGGATTGAGGGGGGGTTATAGAGATGGAGGG
GAACGGGGGGGGGGGGGGGCGGGCTTTTTTTTTTGGGGGGGTTGGGGAGT
GGAGGCAGGGGGGAGTTTTTATAATTTTTCCCCCCCCCCCCCCCCGGGTT
TGTGTGTGGGTGGGGGGTATAGGGTTGGGCCCCCCCCCCAAAAAAAAAAA
AAAAGTTGTGTGGTGGGTGGGGGGGGGGGGGATTGAGGTGCTTCTTCGGG
TAGGGGGTACGTCTGGTGTTTTTTGTGAGTGTGTGGAGGGTATTATAGGG
TATTGGGTAGGAGATGGTGTAGAGATGGTGGCGTTAGGGTGGGTGTGTGG
AGGTTTTGGGAGGAATGCGCGTGGCGATGGGAAGTGGATTTGTGGTCGGT
CGGGTTGGTGGTGGTGGGGGGGGGGGGGTGGGGGGGGGTGTGTGTGCGGT
GTGTGTGTGGATAATATTATGGGTGTATATTGTGGTGTTGTGTGGTCGGT
GTTGCAATGGGGCGTGCGTGTGTTCGTTGGGGGTTGGTGTATGGCCGTTT
ATGGTTTGTTGTACGTGCGGCGTCCGACGGTATGG

Query= MSMg01no321_d20.b1 MSMg01no321_d20.b1 CHROMAT_FILE:
MSMg01no321_d20.b1 PHD_FILE: MSMg01no321_d20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:03:56 2005
         (695 letters)



>mm_chr2_47746184_47747277
          Length = 1094

 Score = 1243 bits (643), Expect = 0.0
 Identities = 679/691 (98%), Gaps = 1/691 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcaatgagagtattacgccccctaaggactccttcccaataagcagggtcaaacag 64
           |||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 gaattcaatgagag-atgatgccccctaaggactccttcccaataagcagggtcaaacag 836

                                                                       
Query: 65  tctggccagcataaagctgggaaatgagtcacccggtgtcagggaggattctggtataat 124
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 835 tctggccagcataaagctgggaaatgagtcacccgatgtcagggaggattctggtataat 776

                                                                       
Query: 125 ttactctgcaagaaggttatccttcaaaagcaggtctccttttttctttgtgttcaccag 184
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 775 ttactctgcaagaaggttatccttcaaaagcaggtctccttttctctttgtgttcaccag 716

                                                                       
Query: 185 aaagaaagtggggaggttgagagttgtcagagtgtccccggtgtgccagggcttttagtg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 aaagaaagtggggaggttgagagttgtcagagtgtccccggtgtgccagggcttttagtg 656

                                                                       
Query: 245 gggttctgactctgagacaaaatacctccctacctggaatggaggatctaatttcatttt 304
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gggttctgactctcagacaaaatacctccctacctggaatggaggatctaatttcatttt 596

                                                                       
Query: 305 ctgctggtctgacatgacctgtagtctgaagccagacaacccagacctcttcaaaactct 364
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ctgctggtctgacatgacctggagtctgaagccagacaacccagacctcttcaaaactct 536

                                                                       
Query: 365 tctccagcagataacaccgcctctcatctctttgcttgttaacaatccatttgagttcaa 424
           ||||||||||||||||  | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tctccagcagataacaaggtctctcatctctttgcttgttaacaatccatttgagttcaa 476

                                                                       
Query: 425 cagcagggaatgctggtgggcatttgaaacaagaagaaaaaaaattcagcaagagaaaag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 cagcagggaatgctggtgggcatttgaaacaagaagaaaaaaaattcagcaagagaaaag 416

                                                                       
Query: 485 gaaacagataaaaagcagtactgtaagaaaggaacaagtagagttggagttatgactgtg 544
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 415 gaaacagataaaaagcagtattgtaagaaaggaacaagtagagttggagttatgactgtg 356

                                                                       
Query: 545 gattggggtgatgaggttagcaattgaactttcaaggaatattgcatgtaattttacttt 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gattggggtgatgaggttagcaattgaactttcaaggaatattgcatgtaattttacttt 296

                                                                       
Query: 605 tgaagtagaatagaaatgataaagcatgactagaaatatacaaaacaggaatgccatgca 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tgaagtagaatagaaatgataaagcatgactagaaatatacaaaacaggaatgccatgca 236

                                          
Query: 665 gttgaaaataatagtcttcagaaattattag 695
           | |||||||||||||||||||||||||||||
Sbjct: 235 ggtgaaaataatagtcttcagaaattattag 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1094
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1084
Effective search space:   742540
Effective search space used:   742540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)