Query= MSMg01no321_f23.b1 MSMg01no321_f23.b1 CHROMAT_FILE:
MSMg01no321_f23.b1 PHD_FILE: MSMg01no321_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:06 2005
(694 letters)
>mm_chr2_40871952_40873049
Length = 1098
Score = 1282 bits (663), Expect = 0.0
Identities = 686/695 (98%), Gaps = 4/695 (0%)
Strand = Plus / Minus
Query: 4 ggaattcaagaacaaagggtcccaaaagttgaattggagaagaattaat---aaaaaaaa 60
|||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct: 898 ggaattcaagaacaaagggttccaaaagttgaattggagaagaattaattaaaaaaaaaa 839
Query: 61 aaatgaacataggaaaaaaccaaagaagcaaatctttggatttgctttggattcagagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 838 aaatgaacataggaaaaaaccaaagaagcaaatctttggatttgctttggattcagagca 779
Query: 121 tacagaaatagaaagacaattaaaacgggtatcataagacaacatgtcttgaaagggaag 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 tgcagaaatagaaagacaattaaaacgggtatcataagacaacatgtcttgaaagggaag 719
Query: 181 gacaaattgaaagaaggaagaaataatgaacaagttaatggttgtatgaggtacatgtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gacaaattgaaagaaggaagaaataatgaacaagttaatggttgtatgaggtacatgtgg 659
Query: 241 tgctgatgtctgcatggtaatggttcttatctgttaagtttatagcacacttgtacattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 tgctgatgtctgcatggtaatggttcttatctgttaagtttatagcacacttgtacattc 599
Query: 301 agggttaggaattacaaaagctaagaatgattgtagcaagttaggtctcattaatgtctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 agggttaggaattacaaaagctaagaatgattgtagcaagttaggtctcattaatgtctt 539
Query: 361 ctgtccaattgcatgggtctcacccattatttaaagaagggcaactgagatgcaccaaag 420
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct: 538 ctgtccaattgcatgggtctcatctattatttaaagaagggcaactgagatgcaccaaag 479
Query: 421 gacatattcctgaaattactggtctataactagagaatgccgatgaatgccatataatgc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 478 gacatattcctgaaattactggtctataactagagaatgccgatgaatgccatagaatgc 419
Query: 481 ttgatttcatttcacacaccatatatttctgtgtgttggattctcaaagtcctcatttct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ttgatttcatttcacacaccatatatttctgtgtgttggattctcaaagtcctcatttct 359
Query: 541 acctctcactcatgtctatattttgaaattttttatgtttttcttgtacataatagatgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 acctctcactcatgtctatattttgaaattttttatgtttttcttgtacataatagatgc 299
Query: 601 acacagcttattaatcaccacaaatactatgatgcactatctcat-aaaaaatcaatcat 659
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 298 acacagcttattaatcaccacaaatactatgatgcactatctcataaaaaaatcaatcat 239
Query: 660 tgtttacttaaggatttaaaactataatgcatgta 694
|||||||||||||||||||||||||||||||||||
Sbjct: 238 tgtttacttaaggatttaaaactataatgcatgta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 694
Length of database: 1098
Length adjustment: 10
Effective length of query: 684
Effective length of database: 1088
Effective search space: 744192
Effective search space used: 744192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no321_f23.g1 MSMg01no321_f23.g1 CHROMAT_FILE:
MSMg01no321_f23.g1 PHD_FILE: MSMg01no321_f23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:06 2005
(351 letters)
>mm_chr2_40709032_40709782
Length = 751
Score = 640 bits (331), Expect = 0.0
Identities = 338/341 (99%), Gaps = 2/341 (0%)
Strand = Plus / Plus
Query: 1 attcaatacacatggacatgacgatattaagacagaattatttgacaattacagtaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcaatacacatggacatgacgatattaagacagaattatttgacaattacagtaaaaa 260
Query: 61 gtttgcgtgataattggtgaaatttgttagggaaatttacccttacttggacctgaaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttgcgtgataattggtgaaatttgttagggaaatttacccttacttggacctgaaact 320
Query: 121 tatctttataattagcttacaaatttcttgtgaaatgcagccatttatttcagattttag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatctttataattagcttacaaatttcttgtgaaatgcagccatttatttcagattttag 380
Query: 181 gacacagtaagacttaattgcagattgtgagtgtataagaggtgtagaatactgtccttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacacagtaagacttaattgcagattgtgagtgtataagaggtgtagaatactgtccttt 440
Query: 241 caggcctttatagtattgtgtgttgcaaattgagtctctattatattatggagtctcata 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caggcctttatagtagtgtgtgttgcaaattgagtctctattatattatggagtctcata 500
Query: 301 tatctatatatatcacacacacacacacacacacacacaca 341
||||||||||| ||||||||||||||||||||||||||||
Sbjct: 501 tatctatatat--cacacacacacacacacacacacacaca 539
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 751
Length adjustment: 9
Effective length of query: 342
Effective length of database: 742
Effective search space: 253764
Effective search space used: 253764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
