GAACTCCTATAGGCGGAAGCGGGGCGGNAATCATGAATTTATCTAAAACA
TGGTCCTCTACCTTGCAAAGCCCACCTTTGTGTGTGTAGGGTTGACTCAC
CCACCACATGCTACTGATTTTTTTCAAAGTATAGGACTTTCTAAGAGTAT
ATTTTCAATTATTTGGCTGCTTCTTCATAGCAGAAGTTTTGATTTTAAAC
TGTGCTTAATTTTCCTCTCTCTCTCACTTTATTTAAAACATAAATTATAA
CTACAAAAATCTAACAATTTTATTTGAAAGCAATTCTTAGCTTGTATACT
CATATCCTCAAGAAAATTCCATTCAGATTAGTACTTTTGGGTAATTTCCA
AAGACAAGGNCCAAAAGAGTAAAGNAGGNGATCCACATACNGAAGNNATC
TAACTCGTCNTATCCTAGGGCGGGGGGGGAGAAACCACTGAAATGGCCCT
GTCAGATTATACCTGGAAGACTCTCAAATTTTAAAACTATGAGAACACAT
TACATAGGATTAAGCATAGGAGTGGAGAAGTCATTATTAACACAGAATCC
CATTTAAAATACAAGAGTTGCATGAAATTGAAAGGAGCAATGCCAATACA
ATATACACATATACTTTTGCATAGAATGATTTCTTCTTTACCCCAAACAG
GAAGCCAAATATATACACAAGGAACTGTTAAGGTTAAAAAAAAAAGACCC
TCCC

TCGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACTTCATGAACTCAGAATGAGTTAGA
ATGATGTCCATGTTCTTCATGTCTTCAGGCTGATAATCATATCTCATCAT
TCTCCTTGGGTTGGGTTAAAATATGTATTTGTTCTCTCAGCCTCAACATG
GCCCTTTTAAAGATCTCTCTGATGAGGAGTCAGAACATCTATGAATATGT
GCATATGTATAAAGTGATATACACAGGGATCCTTCACCTTATAGATCCTT
CACCTCTTCTCTTGTCTCTAACCATTCTGTGGCCATGGTGCACAAGGCAG
AATATTGGCTTTAGTCTTCCAAACAGACCACTGCTGTGATAAGATATTGG
GACACATTGGTTAGCATTAGATATAATTCTTTAAAACAGCCTGAATTAAC
TGTCAATTGTTAGCACAATTCACTCTGCTGATGTTCTATTTGCTGTTTTA
ACAAACAACTCAGATAAAAACATACTTCATACAGAAATAATAAAATAATA
CCCTCTCTGCCCATGTGGAATATACTTCATGTTAAATAGTGGGAAACAAC
AAGGGCGATATGATAAGAAAAGATAGGACAGAGAATATACTGCATCAATT
AGCTTTGAGTTACAAAGGTAACAGCATCTGTAAAGCCTGTTCCATTAAAT
CAAAGAGGACTCTGCTGACATGTAT

Query= MSMg01no322_l22.b1 MSMg01no322_l22.b1 CHROMAT_FILE:
MSMg01no322_l22.b1 PHD_FILE: MSMg01no322_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:46 2005
         (241 letters)



>mm_chr2_123644034_123644674
          Length = 641

 Score =  427 bits (221), Expect = e-124
 Identities = 233/237 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   tcctctaccttgcaaagcccacctttgtgtgtgtagggttgactcacccaccacatgcta 60
           |||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||
Sbjct: 201 tcctctaccttgcaaagcccacctttgtgtgtgtagggttgacttaatcaccacatgcta 260

                                                                       
Query: 61  ctgatttttttcaaagtataggactttctaagagtatattttcaattatttggctgcttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgatttttttcaaagtataggactttctaagagtatattttcaattatttggctgcttc 320

                                                                       
Query: 121 ttcatagcagaagttttgattttaaactgtgcttaattttcctctctctctcactttatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcatagcagaagttttgattttaaactgtgcttaattttcctctctctctcactttatt 380

                                                                    
Query: 181 taaaacataaattataactacaaaaatctaacaattttatttgaaagcaattcttag 237
           ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taatacataaattataactacaaaaatctaacaattttatttgaaagcaattcttag 437


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space:   146624
Effective search space used:   146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

Query= MSMg01no322_l22.g1 MSMg01no322_l22.g1 CHROMAT_FILE:
MSMg01no322_l22.g1 PHD_FILE: MSMg01no322_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:05:46 2005
         (292 letters)



>mm_chr2_123817769_123818460
          Length = 692

 Score =  495 bits (256), Expect = e-144
 Identities = 283/292 (96%)
 Strand = Plus / Minus

                                                                       
Query: 1   acttcatgaactcagaatgagttagaatgatgtccatgttcttcatgtcttcaggctgat 60
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 492 acttcatgaactcagaatgagttagaatgatgtccatgttcctcatgtcttcaggctgat 433

                                                                       
Query: 61  aatcatatctcatcattctccttgggttgggttaaaatatgtatttgttctctcagcctc 120
             |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 gttcatatctcaccattctccttgggttgggttaaaatatgtatttgttctctcagcctc 373

                                                                       
Query: 121 aacatggcccttttaaagatctctctgatgaggagtcagaacatctatgaatatgtgcat 180
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 aacatggcccttttaatgatctctctgatgaggagtcagaacatctatgaatatgtgcat 313

                                                                       
Query: 181 atgtataaagtgatatacacagggatccttcaccttatagatccttcacctcttctcttg 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 312 atgtataaagtgatatacacagggatccttcaccttatagatccttcacctcttctattg 253

                                                               
Query: 241 tctctaaccattctgtggccatggtgcacaaggcagaatattggctttagtc 292
           |||||| |||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tctctacccacactgtggccatggtgcacaaggcagaatattggctttagtc 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 692
Length adjustment: 9
Effective length of query: 283
Effective length of database: 683
Effective search space:   193289
Effective search space used:   193289
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)