Query= MSMg01no323_f08.b1 MSMg01no323_f08.b1 CHROMAT_FILE:
MSMg01no323_f08.b1 PHD_FILE: MSMg01no323_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:45 2005
(606 letters)
>mm_chr2_96187523_96188528
Length = 1006
Score = 1149 bits (594), Expect = 0.0
Identities = 603/606 (99%)
Strand = Plus / Minus
Query: 1 tatgtcagcagacctttctgctcatcccttggtgatcattaccgactcctacttgccttc 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 806 tatgtcagcagacctttctgctcatcccttggtgatcattactgactcctacttgccttc 747
Query: 61 ttgactgtgggtaactttgctgccaaaatatttggagtgtgtcagggagacactaattca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ttgactgtgggtaactttgctgccaaaatatttggagtgtgtcagggagacactaattca 687
Query: 121 actggaagacagaagaagcatggttacttgcttggggtgtttggcccaagtattctaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 actggaagacagaagaagcatggttacttgcttggggtgtttggcccaagtattctaata 627
Query: 181 atattttgttccttaaacctgcctggagtaattacggctcttaacaattgttatagctca 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 626 atattttgttccttaaacctgcctggagtaattatggctcttaacaattgttatagctca 567
Query: 241 gtagcaaattctgagtgactcttgcaaacagttttatcaaactgacattctaacaaatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gtagcaaattctgagtgactcttgcaaacagttttatcaaactgacattctaacaaatgt 507
Query: 301 cccttgctaaatgtcaagtgagatttctggagggaaacataaaatgcctcttctcgtctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cccttgctaaatgtcaagtgagatttctggagggaaacataaaatgcctcttctcgtctt 447
Query: 361 ctgcatctcaagtttatgtagatcaagaagacaccgcatggctgctgttgttttagcaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ctgcatctcaagtttatgtagatcaagaagacaccgcatggctgctgttgttttagcaaa 387
Query: 421 tcagacatctgcaataatccaccaagaatccttaatcagcccaagctccattcttaacac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tcagacatctgcaataatccaccaagaatccttaatcagcccaagctccattcttaacac 327
Query: 481 tggggagaattaattaagaatgtggaatcagcatcattgtcgatccaggaagctgaactg 540
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tggggagaattaattatgaatgtggaatcagcatcattgtcgatccaggaagctgaactg 267
Query: 541 acttgcagtggtgctgtcctcctgcagttttaattaagcaggaaggagtttggggctgta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 acttgcagtggtgctgtcctcctgcagttttaattaagcaggaaggagtttggggctgta 207
Query: 601 ggacag 606
||||||
Sbjct: 206 ggacag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 606
Length of database: 1006
Length adjustment: 10
Effective length of query: 596
Effective length of database: 996
Effective search space: 593616
Effective search space used: 593616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no323_f08.g1 MSMg01no323_f08.g1 CHROMAT_FILE:
MSMg01no323_f08.g1 PHD_FILE: MSMg01no323_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:06:46 2005
(609 letters)
>mm_chr2_96022136_96023144
Length = 1009
Score = 1108 bits (573), Expect = 0.0
Identities = 598/609 (98%), Gaps = 5/609 (0%)
Strand = Plus / Plus
Query: 1 tcacatacaataatataaatttgcactttctcttgtaaactttagagttttgagttaagc 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 tcacatacaataatataaatttgcactttctcttgtaaacttttgagttttgagttaagc 260
Query: 61 tccaaagtttgtatgagaattatcagttcaaagttgagaaaagaattgatgtgcagatta 120
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 261 tccaaagtttgtatgagaattatcagttcagagttgagaaaagaattgatgtgcagattc 320
Query: 121 attgtggtctctctgttatgctggcactggtatctcagttgagaaattatgaaggaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attgtggtctctctgttatgctggcactggtatctcagttgagaaattatgaaggaaaaa 380
Query: 181 tttcctcttcccaacaactctagccccaagagtcatatgattttctttctttcctttttt 240
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 381 tttcctcttcccaacaactctagccccaagggtcatatgattttctttctttcc-----t 435
Query: 241 tttttttttttttaactagagaaaaatgaggccaaggaccaatctacatttcaatgtcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tttttttttttttaactagagaaaaatgaggccaaggaccaatctacatttcaatgtcaa 495
Query: 301 tctaaccttgcaagccctcagataattcgctgggtactggcttcttctttgtaattggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tctaaccttgcaagccctcagataattcgctgggtactggcttcttctttgtaattggag 555
Query: 361 tgaggtctgactgtcactgcactgcagccaggatccatggagaattgtgttcaaattgga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tgaggtctgactgtcactgcactgcagccaggatccatggagaattgtgttcaaattgga 615
Query: 421 aaggagtttcctctcattaaaagcaaaggaaaccaagtgtaagtcttactgctgttagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aaggagtttcctctcattaaaagcaaaggaaaccaagtgtaagtcttactgctgttagaa 675
Query: 481 gcagccatgtacagactctgttgatcccaggggctgctgtccaggtccatagagagcttt 540
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 676 gcagccatgtacagattctgttgatcccaggggctgctgtccaggtccagagagagcttt 735
Query: 541 ccacagagcacgaaagaacaactctttcctttgcctattactatttaactgcaacttagg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ccacagagcacgaaagaacaactctttcctttgcctattactatttaactgcaacttagg 795
Query: 601 ggtccctga 609
|||||||||
Sbjct: 796 ggtccctga 804
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space: 598401
Effective search space used: 598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
