TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCAAAACCTA
GGATACCCAAGATATAAGATACAATTTCCTAAACACATGAAACTCAAGAA
AAATGAAGACTGAAGTGTGGACACTATGCCCCTCCTTAGAAGTGGGAACA
AAACACCCTTGGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGATTAAA
GGGTGGACCATGTAGAGACTGCCTTATCCAGGGATCCACCCCATAATCAG
CATCCAAACGCTGACACCATTGCATACACTAGCAAGATTTTATCGAAAGG
ACCCAGATGTAGCTGTCTCTTGTGAGACTATGCCGGGGCCTAGCAAACAC
AGAAGTGGATGCCCACAGTCAGCTAATGGATGGATCACAGGGCTCCCAAT
GGAGGAGCAAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTAT
AGGTGGATCAACATTATGAACTAATCAGTACCCCGGAGCTCTTGACTCTA
GCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAG
GCCCATTGGACACACAAACTTTATATGCCCCAGAACAGGGGAACGCCAGG
GCCAAAAAGGGGGAGTGGGCGGGTAGGGGAAGTGGGGGTGNNANNNNNNN
NCNNNGNNNNNANNCNNNNNNNNNCNCNNNNNNNNNNAANNAAAN

AAAAACCGATGATATGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGTATGGAGAGCTGTTGGAC
AGACTTAGCACTGGGGTGCAGATGGAAACTAGACAGATTCTGTCCCCAGC
TGCTCTGCTGTTTCTGTGCCTTGTGTGTACTTGTGGGTCCTTCTTTGGAT
AGTTATTCGAGCAAAAGTGGTTTTCTGACCTGAGGGCTTAGGAATGATAG
CACTCCTGGGAGATCAGCTCTCTCCAGGTGGGATTTAAGTGCTGAGGACT
TTCAGAAAGCTTTAGAACCGGGGCACAGATCCATACTTAGTATTATAACT
GGGATAATAGCAACTCAGAATGGGGTTTGTGTGGTGCATTGACTAGCACC
ACTGCGTTTGTCTAAGAAATATGTGGCATGTAAGTAATTGACAAGTATCA
TGCAAATCTTTAGAAAGAGATACACATCCTAACTCATTTGATGTGAGGAG
CCGCCCTTGCAATCGCCATTACAAGATGGCGCTGATATCTGGTGTTCTAA
CTGGTAAACAAATAGTCTGCATATGTGCTGGGGTATTTTTCCATTCCTTG
TGCCCTGCCTGTCCCGTGGCGTCATCTGGGCTGATAGTGAGCAGCCAGTC
AGGGTGAAATACGTCTCCAACCCCTCTTGTGGCCTATTTAAGGACCGAGT
TTCCTGTGTTCTAGGCCTCCTCCCCCAGAAGCTAATGATCTTTCTC

Query= MSMg01no324_b22.g1 MSMg01no324_b22.g1 CHROMAT_FILE:
MSMg01no324_b22.g1 PHD_FILE: MSMg01no324_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:21 2005
         (667 letters)



>mm_chr2_40240303_40241369
          Length = 1067

 Score = 1243 bits (643), Expect = 0.0
 Identities = 661/667 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   aggtatggagagctgttggacagacttagcactggggtgcagatggaaactagacagatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 aggtatggagagctgttggacagacttagcactggggtgcagatggaaactagacagatt 803

                                                                       
Query: 61  ctgtccccagctgctctgctgtttctgtgccttgtgtgtacttgtgggtccttctttgga 120
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 ctgtccccagctgctccgctgtttctgtgccttgtgtgtacttgtgggtccttctttgga 743

                                                                       
Query: 121 tagttattcgagcaaaagtggttttctgacctgagggcttaggaatgatagcactcctgg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tagttattcgagcaaaagtggttttctgacctgagggcttaggaatgatagcactcctgg 683

                                                                       
Query: 181 gagatcagctctctccaggtgggatttaagtgctgaggactttcagaaagctttagaacc 240
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 682 gagaccagctctctccaggtgggatttaagtgctgaggactttcagaaagctttagaccc 623

                                                                       
Query: 241 ggggcacagatccatacttagtattataactgggataatagcaactcagaatggggtttg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ggggcacagatccatacttagtattataactgggataatagcaactcagaatggggtttg 563

                                                                       
Query: 301 tgtggtgcattgactagcaccactgcgtttgtctaagaaatatgtggcatgtaagtaatt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tgtggtgcattgactagcaccactgcgtttgtctaagaaatatgtggcatgtaagtaatt 503

                                                                       
Query: 361 gacaagtatcatgcaaatctttagaaagagatacacatcctaactcatttgatgtgagga 420
           ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 502 gacaagtatcatgtaaatctttagaaagagatacacatcctaactcatttgatgtgagaa 443

                                                                       
Query: 421 gccgcccttgcaatcgccattacaagatggcgctgatatctggtgttctaactggtaaac 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gccgcccttgcaatcgccattacaagatggcgctgatatctggtgttctaactggtaaac 383

                                                                       
Query: 481 aaatagtctgcatatgtgctggggtatttttccattccttgtgccctgcctgtcccgtgg 540
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aaatagtctgcgtatgtgctggggtatttttccattccttgtgccctgcctgtcccgtgg 323

                                                                       
Query: 541 cgtcatctgggctgatagtgagcagccagtcagggtgaaatacgtctccaacccctcttg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cgtcatctgggctgatagtgagcagccagtcagggtgaaatacgtctccaacccctcttg 263

                                                                       
Query: 601 tggcctatttaaggaccgagtttcctgtgttctaggcctcctcccccagaagctaatgat 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tggcctatttaaggaccgagtttcctgtgttctaggcctcctcccccagaagctaatgat 203

                  
Query: 661 ctttctc 667
           |||||||
Sbjct: 202 ctttctc 196


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space:   694449
Effective search space used:   694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)