Query= MSMg01no324_e12.b1 MSMg01no324_e12.b1 CHROMAT_FILE:
MSMg01no324_e12.b1 PHD_FILE: MSMg01no324_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:33 2005
(621 letters)
>mm_chr2_180795783_180796804
Length = 1022
Score = 1127 bits (583), Expect = 0.0
Identities = 607/615 (98%), Gaps = 1/615 (0%)
Strand = Plus / Minus
Query: 8 gaattccttctgtcctgatatgctgcacatttctctacactttctcac-caggtttagct 66
|||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||
Sbjct: 822 gaattccttctgtcatgatgtgctgcacatttctctacactttctcacacaggtttagct 763
Query: 67 ctctggggagctgggggttggtgtgacagatgccaggctcttcagtgttcttatctttgc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 ctctggggagctgggggttggtgtgacagatgccaggctcttcagtgttcttatctttgc 703
Query: 127 caatagttaatcctgtatggtattggtgaaaaacacctgggtttctctacccttcctgag 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 caatagttaatcctgtatggtattggtgaaaaacacctgggtttctctacccttcctgag 643
Query: 187 ggcaagtccctcaggtagaagttgacccgtttctccagagtcaggtatctacctttctat 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ggcaagtccctcaggtagaagttgacccgtttctccagagtcaggtatctacctttctat 583
Query: 247 acttgccagagtctcttagagctttggaatctcgtataccctgaggcccaggcaaccctg 306
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct: 582 acttgccagagtctcttagagctttgaaagctcgtataccctgaggcccaggcaaccctg 523
Query: 307 gctgccctagggagctggctttcacagctgtgcactgcagggatggtgggccctgaccag 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gctgccctagggagctggctttcacagctgtgcactgcagggatggtgggccctgaccag 463
Query: 367 tccaccaacagataatggaatcttatgtggggcagcacagaaggtgctctcaccctcagt 426
||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 tccactaagagataatggaatcttatgtggggcagcacagaaggtgctctcaccctcagt 403
Query: 427 ctctgagaatcccaaacacccagttctatgatcccagcagtagaaggtaaaggttgatgt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ctctgagaatcccaaacacccagttctatgatcccagcagtagaaggtaaaggttgatgt 343
Query: 487 atgcggccacaggaaactttagtaatgctactgtcttgatagtcggtggagacatgtaca 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 atgcggccacaggaaactttagtaatgctactgtcttgatagtcggtggagacatgtaca 283
Query: 547 gggccctcatcattctaattatgtgtgtaactcttgagaaagccacagcctcacatactg 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 282 gggccctcatcattctaattatgtgtgtaactcttgagaaagccacagcctcacacactg 223
Query: 607 gttttgaaattaaac 621
|||||||||||||||
Sbjct: 222 gttttgaaattaaac 208
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1022
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1012
Effective search space: 618332
Effective search space used: 618332
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_e12.g1 MSMg01no324_e12.g1 CHROMAT_FILE:
MSMg01no324_e12.g1 PHD_FILE: MSMg01no324_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:33 2005
(541 letters)
>mm_chr2_180631292_180632232
Length = 941
Score = 1000 bits (517), Expect = 0.0
Identities = 535/541 (98%)
Strand = Plus / Plus
Query: 1 agcttcctgtctccatacttccagctcccagtcacagcacttcacgtggaagcatccagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcttcctgtctccatacttccagctcccagtcacagcacttcacgtggaagcatccagg 260
Query: 61 agccccacactgcttgccctgaagtctgtgctctggtagtctctacccgaggctccagcc 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agccccgcactgcttgccctgaagtctgtgctctggtagtctctacccgaggctccagcc 320
Query: 121 tctctgcgcctcatcgccccaaccttcactcctgatgcagcgggtgggggcagagatgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctctgcgcctcatcgccccaaccttcactcctgatgcagcgggtgggggcagagatgtt 380
Query: 181 tcagagggaaaattaagatgctagagtgctcctgccatagcttgttagagagacagaaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcagagggaaaattaagatgctagagtgctcctgccatagcttgttagagagacagaaga 440
Query: 241 aaacgtgggaagaacttcaattggcaggagggagcgaagagggtctgattctgcatggcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaacgtgggaagaacttcaattggcaggagggagcgaagagggtctgattctgcatggcg 500
Query: 301 gccccatccaagaggaagcaagacaggtatcagcttctctagtgcacacacacagatctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gccccatccaagaggaagcaagacaggtatcagcttctctagtgcacacacacagatctc 560
Query: 361 ctcccagcctcaggctatgcccagtccacatggcacacaagttctactttccacaataga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcccagcctcaggctatgcccagtccacatggcacacaagttctactttccacaataga 620
Query: 421 gcttcattggcagcacctcccagggctgtgatcaaaaagtcatgggagtccagattgcag 480
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 621 gcttcattggcagcacctcccaggggtgtgatcaaaaagtcatgggagtccagattgcag 680
Query: 481 gggcctctaccttagcccatgcctgtccacttgtaccctaaactctacaggattccgcct 540
||||||||||||||||||||||||| ||||| |||||||||| |||||||||||| ||||
Sbjct: 681 gggcctctaccttagcccatgcctgcccactcgtaccctaaattctacaggattctgcct 740
Query: 541 t 541
|
Sbjct: 741 t 741
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space: 494361
Effective search space used: 494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
