Query= MSMg01no324_f02.b1 MSMg01no324_f02.b1 CHROMAT_FILE:
MSMg01no324_f02.b1 PHD_FILE: MSMg01no324_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:36 2005
(670 letters)
>mm_chr2_128460016_128461085
Length = 1070
Score = 1201 bits (621), Expect = 0.0
Identities = 629/632 (99%)
Strand = Plus / Minus
Query: 37 ggtattgagtaagtattcaataagttattgtggttgcttgaggagatcactggtgcagta 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 ggtattgagtaagtattcaataagttattgtggttgcttgaggagatcactggtgcagta 809
Query: 97 atgaaagtactcgggtgttcacagttcaggttttgaatatgtacttgatattttctttta 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 atgaaagtactcgggtgttcacagttcaggttttgaatatgtacttgatattttctttta 749
Query: 157 ctcttagtctaattacgtcttttgatttttttcatatattttatgaaacaaaagtatata 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 ctcttagtctaattacgtcttttgatttttttcatatattttatgaaacaaaagtatata 689
Query: 217 gatctaaaaatacattataattttatgagaattaatagcttggcactaattaatgtgtat 276
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 688 gatctaaaaatacattataattttatgagaattaatagcttggcattaattaatgtgtat 629
Query: 277 gtttattgaaattggaagaaacatcaaaattaaaataggctcttctgaattgtgtccctt 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 gtttattgaaattggaagaaacatcaaaattaaaataggctcttctgaattgtgtccctt 569
Query: 337 tgtttatcatgagtgtgtattcctgacttcctcctgttaaggcttattttcatctcagtt 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tgtttatcatgagtgtgtattcctgacttcctcctgttaaggcttattttcatctcagtt 509
Query: 397 atttaatttttccagcatggcagcaatttgattggcatgtctgatctcaatgtgcctgag 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 atttaatttttccagcatggcagcaatttgattggcatgtctgatctcaatgtgcctgag 449
Query: 457 cagctgtatcagtacatggttggaggccataggcgatttcaaactggaatgcacagggag 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 cagctgtatcagtacatggttggaggccataggcgatttcaaactggaatgcacagggag 389
Query: 517 aaacataagtctccaagttatcagatcaaagtaagtgaagtcagagganaggatcagagc 576
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 388 aaacataagtctccaagttatcagatcaaagtaagtgaagtcagaggaaaggatcagagc 329
Query: 577 cacaggctgagatgtcagctgcacagcagtggctttgctaccaacagcgataagcgtgct 636
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 328 cacaggctgagatgtcagctgcacagcagtggctttgctaccaacagcgataagtgtgct 269
Query: 637 ggagctcttacatgagtaactttcctccccag 668
||||||||||||||||||||||||||||||||
Sbjct: 268 ggagctcttacatgagtaactttcctccccag 237
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_f02.g1 MSMg01no324_f02.g1 CHROMAT_FILE:
MSMg01no324_f02.g1 PHD_FILE: MSMg01no324_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:36 2005
(471 letters)
>mm_chr2_128282009_128282877
Length = 869
Score = 891 bits (461), Expect = 0.0
Identities = 468/471 (99%), Gaps = 2/471 (0%)
Strand = Plus / Plus
Query: 1 atttcagagcctgtggatgcatgagcagggctggaagtctctaacccgagtcatctagtt 60
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 atttcagagcctgtggatgcatgagcagggctggaagtctctaacccg--tcatctagtt 258
Query: 61 ggcctccaaaggccttctggactttaggtgactccagacagtcctcctagagtggggttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ggcctccaaaggccttctggactttaggtgactccagacagtcctcctagagtggggttt 318
Query: 121 gtcctgctgtaatactggtgaaggctgtggcctcatgttggtgcttactaaagcatccaa 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 319 gtcctgctgtaatactggtgaagggtgtggcctcatgttggtgcttactaaagcatccaa 378
Query: 181 gcttgattgaagagtactaagaagggccaaagaaattctaggtccttctcttgaagatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gcttgattgaagagtactaagaagggccaaagaaattctaggtccttctcttgaagatat 438
Query: 241 gagtgtgagtggcagggagccatgctaacagaggtgttgttccacaggtgagaggcccgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 gagtgtgagtggcagggagccatgctaacagaggtgttgttccacaggtgagaggcccgt 498
Query: 301 ggctgcaattgcttcaaggagagtagaggggctagcgtctgcctcttgaggtgaggtttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ggctgcaattgcttcaaggagagtagaggggctagcgtctgcctcttgaggtgaggtttt 558
Query: 361 ctggagccctgtgtgttctctaatgcagtgcctgatttctagatcattctttgttccgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ctggagccctgtgtgttctctaatgcagtgcctgatttctagatcattctttgttccgca 618
Query: 421 gaatgacaacaagaagtttattattgctgggctcctctaacctcagtgtct 471
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gaatgacaacaagaagtttattattgctgggctcctctaacctcagtgtct 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 869
Length adjustment: 10
Effective length of query: 461
Effective length of database: 859
Effective search space: 395999
Effective search space used: 395999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
