Query= MSMg01no324_i11.b1 MSMg01no324_i11.b1 CHROMAT_FILE:
MSMg01no324_i11.b1 PHD_FILE: MSMg01no324_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:52 2005
(682 letters)
>mm_chr2_41672873_41673954
Length = 1082
Score = 1210 bits (626), Expect = 0.0
Identities = 665/678 (98%)
Strand = Plus / Plus
Query: 5 gaattctctgaatacctttggatatacattgttcttgtgttcaaaaggcatctgctatct 64
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctgaagaattttggatatacattgttcttgtgttcaaaaggcatctgctatct 264
Query: 65 cacacagaaaatgccaacagataaaggatctaagatgttcgatgactgggaatggggagt 124
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| | |
Sbjct: 265 cacacagaaaatgccaacagataaaggatctaagatgttcgatgtctgtgaatgggaaat 324
Query: 125 gttcagatcaaaatgtaatctatgatatattttgtattggttatttatatataacttaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gttcagatcaaaatgtaatctatgatatattttgtattggttatttatatataacttaaa 384
Query: 185 catgtatgtattgggtttttagtaaacaattttacttttaagagtaagttttacatttca 244
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 385 catgtatgtattgggtttttagtaaacagctttacttttaagagtaagttttacatttca 444
Query: 245 ggggattgtagaagcactggcatttttattttcacttcactcagaaccttgtatattgta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggggattgtagaagcactggcatttttattttcacttcactcagaaccttgtatattgta 504
Query: 305 gcataggaggatactgaataacagtgaattccacaggttcaatagccactgtgcagagct 364
|||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 505 gcataggaagatactgaataacagtgaattccactggttcaatagccactgtgcagagct 564
Query: 365 cagtaacatactgaacaagcagcctcatacagctaatccttctaattcacttgacttttg 424
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cagtaagatactgaacaagcagcctcatacagctaatccttctaattcacttgacttttg 624
Query: 425 ccaggcaaaagtcttatcttcagcctaacatgtttatttgataacagtggctcagcaaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccaggcaaaagtcttatcttcagcctaacatgtttatttgataacagtggctcagcaaga 684
Query: 485 atatgaattattatttagagataaagtaatgctagcaaattgaatttatgaataaatgct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atatgaattattatttagagataaagtaatgctagcaaattgaatttatgaataaatgct 744
Query: 545 tttcaattttctttttgatcatgaacaaagaattcatgttaggagtattttcaccatgta 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tttcaattttctttttgatcatgaacaaagaattcatgttaggagtattttcaccatgta 804
Query: 605 gaaggcagatgaatttcatcatgtaagggtacacaggactttcactatgtagcaagcaag 664
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 805 gaaggcagatgaatttcatcatggaagggtacacaggactttcactatgtagcaagcaag 864
Query: 665 tgacttttcccatgtagc 682
||||||||||||||||||
Sbjct: 865 tgacttttcccatgtagc 882
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space: 720384
Effective search space used: 720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no324_i11.g1 MSMg01no324_i11.g1 CHROMAT_FILE:
MSMg01no324_i11.g1 PHD_FILE: MSMg01no324_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:08:52 2005
(588 letters)
>mm_chr2_41826595_41827582
Length = 988
Score = 855 bits (442), Expect = 0.0
Identities = 445/446 (99%), Gaps = 1/446 (0%)
Strand = Plus / Minus
Query: 143 tgtagtttccgatattactaggagacagagctgtcttagttaggactactgcggctgtga 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 988 tgtagtttccgatattactaggagacagagctgtcttagttaggactactgcggctgtga 929
Query: 203 ggaaccaccaaaagtaagacaatttgtagatgaaaacatttagcttggagttgcttccag 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 928 ggaaccaccaaaagtaagacaatttgtagatgaaaacatttagcttggagttgcttccag 869
Query: 263 ttttagagggttgttcatgaccatcatggcatcatggcagcaggcaaacaggcatggctc 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 ttttagagggttgttcatgaccatcatggcatcatggcagcaggcaaacaggcatggctc 809
Query: 323 tggtacagagcttacatctctttttttttttaagatattgaattttgctttaataaatat 382
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 808 tggtacagagcttacatctc-ttttttttttaagatattgaattttgctttaataaatat 750
Query: 383 catcaatcttatgttatcaggagccataatgagctcactaataataatattttcttaaat 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 catcaatcttatgttatcaggagccataatgagctcactaataataatattttcttaaat 690
Query: 443 gtatagaagggcctggtggcaatttttcagatagttttctatggtgcatgccaaggttca 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gtatagaagggcctggtggcaatttttcagatagttttctatggtgcatgccaaggttca 630
Query: 503 gggaggatgacttggtagaaaaatggggttaggttttctattcagctgctcttttgcaat 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gggaggatgacttggtagaaaaatggggttaggttttctattcagctgctcttttgcaat 570
Query: 563 tcatcaggtgagtcagagcttacatc 588
||||||||||||||||||||||||||
Sbjct: 569 tcatcaggtgagtcagagcttacatc 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
