Query= MSMg01no326_a16.b1 MSMg01no326_a16.b1 CHROMAT_FILE:
MSMg01no326_a16.b1 PHD_FILE: MSMg01no326_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:40 2005
(596 letters)
>mm_chr2_38474092_38475086
Length = 995
Score = 1106 bits (572), Expect = 0.0
Identities = 592/602 (98%), Gaps = 7/602 (1%)
Strand = Plus / Plus
Query: 1 acagagaaaccctgtctcaaaaaaaaccaaaaagaagttgtgtatccccaccaagccctc 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 acagagaaaccctgtctcaaaaaaa-ccaaaaagaagttgtgtatccccaccaagccctc 259
Query: 61 ctacaagggagctgctctaagaaacaaagtcctatacatagacgggctattgtttagatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctacaagggagctgctctaagaaacaaagtcctatacatagacgggctattgtttagatc 319
Query: 121 agcaaacagcagcaataaaacaaaaacctagagaaatctaaagttctaataagcaagaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agcaaacagcagcaataaaacaaaaacctagagaaatctaaagttctaataagcaagaat 379
Query: 181 ggaagaaataaataatgcaatattatatgtacaaatcaattaaacatgtcaaaacagaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggaagaaataaataatgcaatattatatgtacaaatcaattaaacatgtcaaaacagaaa 439
Query: 241 tattttcatttgcaataaaaagggtccacagggaaccttgaggagagagagcatcttcta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tattttcatttgcaataaaaagggtccacagggaaccttgaggagagagagcatcttcta 499
Query: 301 tggcagtattagtagacgtgcttccataatacaaatgacacaaggccgcaagcccaagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tggcagtattagtagacgtgcttccataatacaaatgacacaaggccgcaagcccaagaa 559
Query: 361 tcaaaatagctgcctactcctgaatgactatttctactctgtttacttgtactttatttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcaaaatagctgcctactcctgaatgactatttctactctgtttacttgtactttatttt 619
Query: 421 tctctccaaaaatcacacactgcttgtaattttaaggtataaacctggagaaaaatccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tctctccaaaaatcacacactgcttgtaattttaaggtataaacctggagaaaaatccaa 679
Query: 481 cattataaaagaaaaaaacaaagctagcataccaccaagatcttgctactattacatgca 540
||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||
Sbjct: 680 cattataaaagaaaaaaacaaagctagcaaatcaccaagatcttgctaccattacatgca 739
Query: 541 gatgcagcagcagcagcagcagcagca------ctcctcatgaaatcgccacacagactg 594
||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 740 gatgcagcagcagcagcagcagcagcagcagcactcctcatgaaatcgccacacagactg 799
Query: 595 ga 596
||
Sbjct: 800 ga 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 995
Length adjustment: 10
Effective length of query: 586
Effective length of database: 985
Effective search space: 577210
Effective search space used: 577210
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_a16.g1 MSMg01no326_a16.g1 CHROMAT_FILE:
MSMg01no326_a16.g1 PHD_FILE: MSMg01no326_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:40 2005
(646 letters)
>mm_chr2_38603865_38604910
Length = 1046
Score = 1191 bits (616), Expect = 0.0
Identities = 640/656 (97%), Gaps = 15/656 (2%)
Strand = Plus / Minus
Query: 1 actatgtagactggcctagaaggcacagagatctgcctgcc-----tctactgagaactg 55
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 679 actatgtagactggcctagaaggcacagagatctgcctgcctctagtctactgagaactg 620
Query: 56 gaacagataagttttcattttgttcataaacaacttttgagtgtgcttctaactgtctac 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 gaacagataagttttcattttgttcataaacaacttttgagtgtgcttctaactgtctac 560
Query: 116 atttccttctagctatcagagaagatggcatgcctggaggccggaacaagagcattggac 175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 atttccttctagctatcagagaagatggcatgcctggaggccggaacaagagcattggac 500
Query: 176 cagtccaggtgagtcctatacccactttcttagtgtggtttagaaacgtggtaatgtggc 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cagtccaggtgagtcctatacccactttcttagtgtggtttagaaacgtggtaatgtggc 440
Query: 236 tccccaggccgtttaccttgatcttcttctctgccatctttgcttttacttctgtaaaaa 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 tccccaggccgtttaccttgatcttcttctctgccatctttgcttttacttctgtaaaaa 380
Query: 296 ctgcttttataatctgaatgtgaaaacacttttaaagtcttttta-----tcccccaata 350
||||||||||||||||||||||||||||||||||||||||||||| | | ||
Sbjct: 379 ctgcttttataatctgaatgtgaaaacacttttaaagtctttttatttttt-----agta 325
Query: 351 acgtgcattggtgttttgcctgcaagcatatctgggtgagggtgccaggttttgtaatta 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acgtgcattggtgttttgcctgcaagcatatctgggtgagggtgccaggttttgtaatta 265
Query: 411 cacacagagctgctatttgggtgctgggaattgtacctgagacctctgaaagagcattca 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cacacagagctgctatttgggtgctgggaattgtacctgagacctctgaaagagcattca 205
Query: 471 gtgctcataactgcagagccatttctccgtcccccacttttaagtgttggagttaataga 530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gtgctcataactgcagagccatttctccgtcccccacttttaagtgttggagttaataga 145
Query: 531 ttcaagctcttatgatccctcaatccttcctaaaatgtcatagacagttctgattctaaa 590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ttcaagctcttatgatccctcaatccttcctaaaatgtcatagacagttctgattctaaa 85
Query: 591 ccatacaaaaagttattctcctactttgatccattacttaaagttataggtaattt 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 ccatacaaaaagttattctcctactttgatccattacttaaagttataggtaattt 29
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
