Query= MSMg01no326_c21.b1 MSMg01no326_c21.b1 CHROMAT_FILE:
MSMg01no326_c21.b1 PHD_FILE: MSMg01no326_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:50 2005
(675 letters)
>mm_chr2_86963664_86964738
Length = 1075
Score = 1228 bits (635), Expect = 0.0
Identities = 662/671 (98%)
Strand = Plus / Minus
Query: 5 gaattcagctacaatgcgaaatgtttttgaaaagttgtttgaaagcctatttgggaaaaa 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 gaattcagctacaatgggaaatgtttttgaaaagttgtttgaaagcctatttgggaaaaa 816
Query: 65 ggaaatgaggattctcatggtggacttagatgcagctagaacaatgatgaccttgtacaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 ggaaatgaggattctcatggtggacttagatgcagctagaacaatgatgaccttgtacaa 756
Query: 125 actgaagctgggagagattgtgacaaccatccctacaataggtttccatgtggacacctt 184
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 755 actgaagctgggagagattgtgacaaccatccctacaataggtttccacgtggacacctt 696
Query: 185 agaacataaaaacataagcttcactgtctgggttgttggtgaccaggacaaaaatcagac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 agaacataaaaacataagcttcactgtctgggttgttggtgaccaggacaaaaatcagac 636
Query: 245 ctttgtggcaacattacttcctgaatactcaaggtctgatatttgtggtttactgaaatg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 ctttgtggcaacattacttcctgaatactcaaggtctgatatttgtggtttactgaaatg 576
Query: 305 acagagagcgggtcaacaaggcccgggaagaattgaccagaatgctagtagatgatgagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 acagagagcgggtcaacaaggcccgggaagaattgaccagaatgctagtagatgatgagc 516
Query: 365 tcagagatgcacccttattggtgtttgtaaacaaacaggatcttcctaatcctatgaaca 424
||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 515 tcagagatgcagtcttattggtgcttgtaaacaaacaggatcttcctaatgctatgaaca 456
Query: 425 cagcagagatcacagacaagcttggcttacatttccttcatcagagaaactggtacattc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cagcagagatcacagacaagcttggcttacatttccttcatcagagaaactggtacattc 396
Query: 485 aggctacctgtgagaccagtgcagatgagctttacaaaggcgtggactggttctccaacc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 aggctacctgtgagaccagtgcagatgagctttacaaaggcgtggactggttctccaacc 336
Query: 545 agctcaaaaactgggagtgatcagaagcaacccattcccccatgcactgtggcaaaacca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 agctcaaaaactgggagtgatcagaagcaacccattcccccatgcactgtggcaaaacca 276
Query: 605 gctggccttacctgtgcatgtgagcatgtgaggagcccatggggctgtgtggctgggagt 664
|||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 275 tctggccttacctgtgcatgtgaacatgtgaggagcccatggggctgtttggctgggagt 216
Query: 665 gggggcatctt 675
|||||||||||
Sbjct: 215 gggggcatctt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space: 708225
Effective search space used: 708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no326_c21.g1 MSMg01no326_c21.g1 CHROMAT_FILE:
MSMg01no326_c21.g1 PHD_FILE: MSMg01no326_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:50 2005
(649 letters)
>mm_chr2_86830249_86831297
Length = 1049
Score = 1197 bits (619), Expect = 0.0
Identities = 644/655 (98%), Gaps = 6/655 (0%)
Strand = Plus / Plus
Query: 1 caggttgccttaaagaactgtcaatatactgaaaaatatcgtggtagtatttttttaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 195 caggttgccttaaagaactgtcaatatactgaaaaatatcgtggtagtattttttaaaat 254
Query: 61 gtcaaagaaattgttgtaaaatgaagtacttatctccattctctctgttcctcccttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 gtcaaagaaattgttgtaaaatgaagtacttatctccattctctctgttcctcccttctt 314
Query: 121 ccccatctttctccctc---ctcttttcttctcctctactctctttctaatcttg---tt 174
||||||||| ||||||| ||||||| ||||||||||||||||||||||||||| ||
Sbjct: 315 ccccatcttcctccctccttctcttttattctcctctactctctttctaatcttgttttt 374
Query: 175 tttttttctttcctttacatcccaatttttcttccattactcattcttttcatttaaaat 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tttttttctttcctttacatcccaatttttcttccattactcattcttttcatttaaaat 434
Query: 235 tttggaacaactacagtagaagattttaaatggatacatatgtatgtaattaaatgacaa 294
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 attggaacaactacagtagaagattttaaatggatacatatgtatgtaattaaatgacaa 494
Query: 295 atcccatgtcagtagtgacttggagacaaggatacctaacgttaaaaaacacaattgata 354
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 495 atcccatgtcagtagtgacttggagacaaggatacctaacgttaaaaaacagaattgata 554
Query: 355 agaagaacaagggtcaaataagtttcagttacataaattgtgaatttctgtggcaaataa 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 agaagaacaagggtcaaataagtttcagttacataaattgtgaatttctgtggcaaataa 614
Query: 415 aaattaagtatgaaataatgcaagcagggaaaatccgttatacttttatgtattattctt 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aaattaagtatgaaataatgcaagcagggaaaatccgttatacttttatgtattattctt 674
Query: 475 tgtgaaaacaaaataaaagaaaccaaaaaaaattggtttttacattatatcaaatgctgt 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 tgtgaaaacaaaataaaagaaaccaaaaaaaattggtttttacattatatcaaatgctgt 734
Query: 535 ttccaaaaatatcttcaggtgaatctgttttctcttcttgtgcaagttcctcactgacta 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ttccaaaaatatcttcaggtgaatctgttttctcttcttgtgcaagttcctcactgacta 794
Query: 595 tgcttcaacatggcattctgcttcatcagaaaaataaagaacatatcctatttac 649
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 tgcttcaacatggcattctgcttcatcagaaaaataaagaacatatcctatttac 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
