Query= MSMg01no326_f05.b1 MSMg01no326_f05.b1 CHROMAT_FILE:
MSMg01no326_f05.b1 PHD_FILE: MSMg01no326_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:01 2005
(250 letters)
>mm_chr2_169785420_169786069
Length = 650
Score = 379 bits (196), Expect = e-110
Identities = 250/300 (83%), Gaps = 50/300 (16%)
Strand = Plus / Plus
Query: 1 gtctatatagagttctaagccagccagggctatgctacatagtaagacctcgagcacgcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151 gtctatatagagttctaagccagccagggctatgctacatagtaagacctcgagcacgcg 210
Query: 61 tgc------------gtgtgtgtgtgtgtgtgtgtgtgtgtctgtg-------------- 94
||| |||||||||||||||||||||||||||||||
Sbjct: 211 tgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtc 270
Query: 95 ------------------------tgtgtgtgtgtgaatgatcaccatcattatcatcat 130
||||||||||||||||||||||||||||||||||||
Sbjct: 271 tgtgtgtgtctgtgtgtgtctgtctgtgtgtgtgtgaatgatcaccatcattatcatcat 330
Query: 131 caccaccaccaccaccattatctgcatcatcaacgtcaggcgctgaggatttagcagtta 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 caccaccaccaccaccattatctgcatcatcaacgtcaggcgctgaggatttagcagtta 390
Query: 191 ggtaccaggctttacattctattgtcttctctcaacaaatgttggtgctgagcaatgccc 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ggtaccaggctttacattctattgtcttctctcaacaaatgttggtgctgagcaatgccc 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no326_f05.g1 MSMg01no326_f05.g1 CHROMAT_FILE:
MSMg01no326_f05.g1 PHD_FILE: MSMg01no326_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:11:01 2005
(305 letters)
>mm_chr2_169940548_169941252
Length = 705
Score = 571 bits (295), Expect = e-167
Identities = 301/303 (99%)
Strand = Plus / Minus
Query: 3 gaattctgtgagtatgccgcagcccagaagacatctctgaggtaccacttggagagacat 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaattctgtgagtatgccgcagcccagaagacatctctgaggtaccacttggagagacat 446
Query: 63 cacaaagacaagcagccggtggatgctgccgctgagtccaaaagtgaaggcaggagccag 122
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 445 cacaaagacaagcagccggtggatgctgccgctgagtccaaaagtgaaggccggagccag 386
Query: 123 gagccgcaggatgcgctactaacggctgctgacagtgcgcagaccaaaaatttaaagaga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gagccgcaggatgcgctactaacggctgctgacagtgcgcagaccaaaaatttaaagaga 326
Query: 183 tttcttgatggtgccaaagatgttaagggaagcccacctgccaagcagcttaaggagatg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tttcttgatggtgccaaagatgttaagggaagcccacctgccaagcagcttaaggagatg 266
Query: 243 ccttctgtcttccagagtgttctctcaccagcacacaacaacgatactcaggatttccat 302
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 265 ccttctgtcttccagagtgttctctcaccagcacacagcaacgatactcaggatttccat 206
Query: 303 aaa 305
|||
Sbjct: 205 aaa 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 305
Length of database: 705
Length adjustment: 9
Effective length of query: 296
Effective length of database: 696
Effective search space: 206016
Effective search space used: 206016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|