MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-327K17
Chromosome	2 (Build37)
Map Location	35,269,576 - 35,269,799
singlet/doublet	singlet
Overlap gene	Ggta1
Upstream gene	Mapkap1, LOC623448, LOC623269, Gapvd1, Hspa5, Rabepk, Fbxw2, EG623370, Psmd5, D730039F16Rik, Phf19, Traf1, Hc, AI182371, Rab14, Gsn, Stom, LOC654354, 4930568D16Rik, 4930402F06Rik
Downstream gene	LOC666042, LOC100042194, Dab2ip, Ttll11, Ndufa8, 1700010A17Rik, Lhx6, Rbm18, LOC100042236, Mrrf, LOC100040493, Ptgs1, Olfr334-ps1, Olfr335, Olfr336-ps1, Olfr337-ps1, Olfr338, LOC675440
Link	Open Mouse BAC browser

Click to get alignment info.

name	Mapkap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227743 MGI:2444554
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC623448 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623448
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 1430 ESTs, 7 Proteins pseudo : _no_value

name	LOC623269 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623269
definition	note : DnaJ homolog subfamily B member 6 pseudogene pseudo : _no_value

name	Gapvd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66691 MGI:1913941
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hspa5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14828 MGI:95835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rabepk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227746 MGI:2139530
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fbxw2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30050 MGI:1353435
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG623370 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:623370 MGI:3644358
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Psmd5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66998 MGI:1914248
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D730039F16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77996 MGI:1925246
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Phf19 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74016 MGI:1921266
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Traf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22029 MGI:101836
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Hc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15139 MGI:96031
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AI182371 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98870 MGI:2138853
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab14 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68365 MGI:1915615
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gsn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227753 MGI:95851
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stom (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13830 MGI:95403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC654354 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:654354
definition	note : glyoxalase 1 pseudogene pseudo : _no_value

name	4930568D16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75859 MGI:1923109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 14 Proteins

name	4930402F06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74854 MGI:1922104
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ggta1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14594 MGI:95704
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666042 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666042
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100042194 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042194
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	Dab2ip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69601 MGI:1916851
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttll11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74410 MGI:1921660
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ndufa8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68375 MGI:1915625
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700010A17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75495 MGI:1922745
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lhx6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16874 MGI:1306803
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 4 mRNAs

name	Rbm18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67889 MGI:1915139
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042236 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042236
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	Mrrf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67871 MGI:1915121
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040493 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040493
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Ptgs1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19224 MGI:97797
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr334-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:257991 MGI:3030168
definition	gene_synonym : MOR137-1P note : olfactory receptor 334, pseudogene 1 pseudo : _no_value

name	Olfr335 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666118 MGI:3030169
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr336-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258093 MGI:3030170
definition	gene_synonym : MOR136-15P note : olfactory receptor 336, pseudogene 1 pseudo : _no_value

name	Olfr337-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258092 MGI:3030171
definition	gene_synonym : MOR136-16P note : olfactory receptor 337, pseudogene 1 pseudo : _no_value

name	Olfr338 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:258949 MGI:3030172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC675440 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675440
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 656 ESTs, 7 Proteins

name	Mapkap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61098167 GeneID:227743 MGI:2444554
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitogen-activated protein kinase associated protein 1 transcript_id : NM_177345.3

name	Gapvd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40254513 GeneID:66691 MGI:1913941
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GTPase activating protein and VPS9 domains 1 transcript_id : NM_025709.2

name	Hspa5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981721 GeneID:14828 MGI:95835
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heat shock 70kD protein 5 (glucose-regulated protein) transcript_id : NM_022310.2

name	Rabepk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142368010 GeneID:227746 MGI:2139530
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rab9 effector protein with kelch motifs transcript_id : NM_145522.3

name	Fbxw2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375978 GeneID:30050 MGI:1353435
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : F-box and WD-40 domain protein 2 transcript_id : NM_013890.3

name	EG623370 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82884412 GeneID:623370 MGI:3644358
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG623370 transcript_id : XM_887818.1

name	Psmd5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134053912 GeneID:66998 MGI:1914248
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 transcript_id : NM_080554.2

name	D730039F16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142380367 GeneID:77996 MGI:1925246
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D730039F16 gene transcript_id : NM_030021.2

name	Phf19 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350606 GeneID:74016 MGI:1921266
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PHD finger protein 19 transcript_id : NM_028716.2

name	Traf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88900511 GeneID:22029 MGI:101836
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Tnf receptor-associated factor 1 transcript_id : NM_009421.3

name	Hc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754163 GeneID:15139 MGI:96031
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hemolytic complement transcript_id : NM_010406.1

name	AI182371 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369448 GeneID:98870 MGI:2138853
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI182371 transcript_id : NM_178885.3

name	Rab14 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86355517 GeneID:68365 MGI:1915615
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB14, member RAS oncogene family transcript_id : NM_026697.3

name	Gsn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130216 GeneID:227753 MGI:95851
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gelsolin transcript_id : NM_146120.3

name	Stom (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129913 GeneID:13830 MGI:95403
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : stomatin transcript_id : NM_013515.2

name	4930568D16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94366402 GeneID:75859 MGI:1923109
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 14 Proteins product : RIKEN cDNA 4930568D16 gene transcript_id : XM_130220.4

name	4930402F06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:123959717 GeneID:74854 MGI:1922104
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930402F06 gene transcript_id : NM_001080709.1

name	Ggta1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142369425 GeneID:14594 MGI:95704
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycoprotein galactosyltransferase alpha 1, 3 transcript_id : NM_010283.2

name	LOC100042194 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249294 GeneID:100042194
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100042194 transcript_id : XM_001479211.1

name	Dab2ip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:48675374 GeneID:69601 MGI:1916851
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : disabled homolog 2 (Drosophila) interacting protein transcript_id : NM_001001602.1

name	Ttll11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110625990 GeneID:74410 MGI:1921660
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tubulin tyrosine ligase-like family, member 11 transcript_id : NM_028921.1

name	Ndufa8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893199 GeneID:68375 MGI:1915625
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8 transcript_id : NM_026703.2

name	1700010A17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130578 GeneID:75495 MGI:1922745
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1700010A17 gene transcript_id : NM_029309.2

name	Lhx6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133893072 GeneID:16874 MGI:1306803
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM homeobox protein 6 transcript_id : NM_001083125.1

name	Lhx6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133891793 GeneID:16874 MGI:1306803
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM homeobox protein 6 transcript_id : NM_008500.2

name	Lhx6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892050 GeneID:16874 MGI:1306803
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM homeobox protein 6 transcript_id : NM_001083127.1

name	Lhx6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892445 GeneID:16874 MGI:1306803
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM homeobox protein 6 transcript_id : NM_001083126.1

name	Rbm18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377962 GeneID:67889 MGI:1915139
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding motif protein 18 transcript_id : NM_026434.3

name	LOC100042236 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249296 GeneID:100042236
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : hypothetical protein LOC100042236 transcript_id : XM_001479253.1

name	Mrrf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21312751 GeneID:67871 MGI:1915121
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mitochondrial ribosome recycling factor transcript_id : NM_026422.1

name	LOC100040493 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249255 GeneID:100040493
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040493 transcript_id : XM_001474797.1

name	Ptgs1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144227245 GeneID:19224 MGI:97797
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prostaglandin-endoperoxide synthase 1 transcript_id : NM_008969.3

name	Olfr335 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487172 GeneID:666118 MGI:3030169
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 335 transcript_id : NM_001081410.1

name	Olfr338 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22129020 GeneID:258949 MGI:3030172
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : olfactory receptor 338 transcript_id : NM_146947.1

name	LOC675440 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249298 GeneID:675440
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 656 ESTs, 6 Proteins product : similar to SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae), transcript variant 1 transcript_id : XM_001479274.1

name	LOC675440 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249300 GeneID:675440
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 350 ESTs, 2 Proteins product : similar to SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae), transcript variant 2 transcript_id : XM_001479282.1

name	Mapkap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893485 CCDS:CCDS15948.1 GeneID:227743 MGI:2444554
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA] codon_start : 1 product : mitogen-activated protein kinase associated protein 1 protein_id : NP_796319.1

name	Gapvd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254514 CCDS:CCDS15949.1 GeneID:66691 MGI:1913941
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA] GO_process : GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 product : GTPase activating protein and VPS9 domains 1 protein_id : NP_079985.2

name	Hspa5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981722 CCDS:CCDS15950.1 GeneID:14828 MGI:95835
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043022 - ribosome binding [Evidence IDA] GO_process : GO:0006983 - ER overload response [Evidence IDA]; GO:0006457 - protein folding [Evidence IEA]; GO:0006986 - response to unfolded protein [Evidence IEA] codon_start : 1 exception : mismatches in translation note : glucose regulated protein, 78 kDa; heat shock 70kD protein 5 (glucose-regulated protein, 78kD) product : heat shock 70kD protein 5 (glucose-regulated protein) protein_id : NP_071705.2

name	Rabepk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559945 CCDS:CCDS15951.1 GeneID:227746 MGI:2139530
definition	codon_start : 1 note : novel protein containing a Kelch motif product : Rab9 effector p40 protein_id : NP_663497.2

name	Fbxw2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980723 CCDS:CCDS15952.1 GeneID:30050 MGI:1353435
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 exception : mismatches in translation product : F-box and WD-40 domain protein 2 protein_id : NP_038918.2

name	EG623370 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82884413 GeneID:623370 MGI:3644358
definition	codon_start : 1 product : similar to beta-1,3-N-acetylglucosaminyltransferase 5 protein_id : XP_892911.1

name	Psmd5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134053913 CCDS:CCDS15953.1 GeneID:66998 MGI:1914248
definition	GO_component : GO:0005829 - cytosol [Evidence IEA]; GO:0043234 - protein complex [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : proteasome 26S non-ATPase subunit 5 protein_id : NP_542121.2

name	D730039F16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037515 CCDS:CCDS15954.1 GeneID:77996 MGI:1925246
definition	codon_start : 1 product : hypothetical protein LOC77996 protein_id : NP_084297.1

name	Phf19 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311998 CCDS:CCDS15955.1 GeneID:74016 MGI:1921266
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : PHD finger protein 19 protein_id : NP_082992.1

name	Traf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981953 CCDS:CCDS15956.1 GeneID:22029 MGI:101836
definition	GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : Tnf receptor-associated factor 1 protein_id : NP_033447.2

name	Hc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754164 CCDS:CCDS15957.1 GeneID:15139 MGI:96031
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA]; GO:0005579 - membrane attack complex [Evidence IEA] GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0006956 - complement activation [Evidence IEA]; GO:0006957 - complement activation, alternative pathway [Evidence IEA]; GO:0006958 - complement activation, classical pathway [Evidence IEA]; GO:0019835 - cytolysis [Evidence IEA]; GO:0006955 - immune response [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA]; GO:0045087 - innate immune response [Evidence IEA] codon_start : 1 product : hemolytic complement protein_id : NP_034536.1

name	AI182371 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30725720 CCDS:CCDS15958.1 GeneID:98870 MGI:2138853
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0004866 - endopeptidase inhibitor activity [Evidence IEA] GO_process : GO:0006956 - complement activation [Evidence IEA]; GO:0006954 - inflammatory response [Evidence IEA] codon_start : 1 product : hypothetical protein LOC98870 protein_id : NP_849216.1

name	Rab14 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18390323 CCDS:CCDS15959.1 GeneID:68365 MGI:1915615
definition	GO_component : GO:0000178 - exosome (RNase complex) [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : RAB14, member RAS oncogene family protein_id : NP_080973.1

name	Gsn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28916693 CCDS:CCDS15960.1 GeneID:227753 MGI:95851
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence ISS]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0005829 - cytosol [Evidence ISS]; GO:0005576 - extracellular region [Evidence ISS]; GO:0030027 - lamellipodium [Evidence IDA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence ISS] GO_process : GO:0030041 - actin filament polymerization [Evidence ISS]; GO:0051014 - actin filament severing [Evidence ISS]; GO:0051016 - barbed-end actin filament capping [Evidence ISS]; GO:0016192 - vesicle-mediated transport [Evidence IMP] codon_start : 1 product : gelsolin protein_id : NP_666232.2

name	Stom (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7710018 CCDS:CCDS15961.1 GeneID:13830 MGI:95403
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : protein 7.2b product : erythrocyte protein band 7.2 protein_id : NP_038543.1

name	4930568D16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82884425 GeneID:75859 MGI:1923109
definition	codon_start : 1 product : hypothetical protein LOC75859 protein_id : XP_130220.3

name	4930402F06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:123959718 GeneID:74854 MGI:1922104
definition	codon_start : 1 product : hypothetical protein LOC74854 protein_id : NP_001074178.1

name	Ggta1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753982 CCDS:CCDS15964.1 GeneID:14594 MGI:95704
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0047276 - N-acetyllactosaminide 3-alpha-galactosyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016757 - transferase activity, transferring glycosyl groups [Evidence IEA]; GO:0016758 - transferase activity, transferring hexosyl groups [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : glycoprotein alpha galactosyl transferase 1; alpha Gal product : glycoprotein galactosyltransferase alpha 1, 3 protein_id : NP_034413.1

name	LOC100042194 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249295 GeneID:100042194
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479261.1

name	Dab2ip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:48675375 CCDS:CCDS15965.1 GeneID:69601 MGI:1916851
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0051056 - regulation of small GTPase mediated signal transduction [Evidence IEA] codon_start : 1 product : DAB2-interacting protein protein_id : NP_001001602.1

name	Ttll11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625991 GeneID:74410 MGI:1921660
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0004835 - tubulin-tyrosine ligase activity [Evidence IEA] GO_process : GO:0006464 - protein modification [Evidence IEA] codon_start : 1 note : polyglutamylase product : tubulin tyrosine ligase-like family, member 11 protein_id : NP_083197.1

name	Ndufa8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312012 CCDS:CCDS15967.1 GeneID:68375 MGI:1915625
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] codon_start : 1 product : NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8 protein_id : NP_080979.1

name	1700010A17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:58037413 CCDS:CCDS15968.1 GeneID:75495 MGI:1922745
definition	codon_start : 1 note : novel protein containing MORN domains product : hypothetical protein LOC75495 protein_id : NP_083585.1

name	Lhx6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133893073 GeneID:16874 MGI:1306803
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; LIM-homeodomain protein 6.1 product : LIM homeobox protein 6 isoform 2 protein_id : NP_001076594.1

name	Lhx6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133892051 GeneID:16874 MGI:1306803
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 4 is encoded by transcript variant 4; LIM-homeodomain protein 6.1 product : LIM homeobox protein 6 isoform 4 protein_id : NP_001076596.1

name	Lhx6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133891794 GeneID:16874 MGI:1306803
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; LIM-homeodomain protein 6.1 product : LIM homeobox protein 6 isoform 1 protein_id : NP_032526.2

name	Lhx6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133892446 GeneID:16874 MGI:1306803
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; LIM-homeodomain protein 6.1 product : LIM homeobox protein 6 isoform 3 protein_id : NP_001076595.1

name	Rbm18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385930 CCDS:CCDS15969.1 GeneID:67889 MGI:1915139
definition	GO_function : GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 product : RNA binding motif protein 18 protein_id : NP_080710.1

name	LOC100042236 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249297 GeneID:100042236
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479303.1

name	Mrrf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312752 GeneID:67871 MGI:1915121
definition	GO_component : GO:0005739 - mitochondrion [Evidence IEA] codon_start : 1 product : mitochondrial ribosome recycling factor protein_id : NP_080698.1

name	LOC100040493 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249256 GeneID:100040493
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474847.1

name	Ptgs1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679537 CCDS:CCDS15970.1 GeneID:19224 MGI:97797
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005792 - microsome [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen [Evidence IEA]; GO:0004601 - peroxidase activity [Evidence IEA]; GO:0004666 - prostaglandin-endoperoxide synthase activity [Evidence IEA] GO_process : GO:0008217 - blood pressure regulation [Evidence IMP]; GO:0006633 - fatty acid biosynthesis [Evidence IEA]; GO:0030216 - keratinocyte differentiation [Evidence NAS]; GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0001516 - prostaglandin biosynthesis [Evidence IMP] codon_start : 1 note : cyclooxygenase 1 product : prostaglandin-endoperoxide synthase 1 protein_id : NP_032995.1

name	Olfr335 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487173 GeneID:666118 MGI:3030169
definition	codon_start : 1 note : GA_x6K02T2NLDC-33001193-33002131; olfactory receptor W1UHSO2293FU.01 product : olfactory receptor 335 protein_id : NP_001074879.1

name	Olfr338 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22129021 CCDS:CCDS15971.1 GeneID:258949 MGI:3030172
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004984 - olfactory receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence ISS] [Evidence IEA]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA] [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : GA_x6K02T2NLDC-33070879-33071799; olfactory receptor MOR136-5 product : olfactory receptor 338 protein_id : NP_667158.1

name	LOC675440 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249299 GeneID:675440
definition	codon_start : 1 product : similar to SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae) isoform 1 protein_id : XP_001479324.1

name	LOC675440 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249301 GeneID:675440
definition	codon_start : 1 product : similar to SMT3 suppressor of mif two 3 homolog 2 (S. cerevisiae) isoform 2 protein_id : XP_001479332.1

name	LOC666042 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666042
definition	number : 1 pseudo : _no_value

name	LOC623448 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149249291 GeneID:623448
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 1430 ESTs, 7 Proteins product : similar to Ribosomal protein S3a pseudo : _no_value transcript_id : XR_033976.1

clone name	MSMg01-386E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-519L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477M12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-161B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-188O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-204P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527P24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-070H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527B04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-473C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-533G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-327B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-079P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337P13
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-036O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-285O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126C16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-346A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165F07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296N10
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-327K17.T7 (MSMg01no327_k17.b1)	MSMg01-327K17.TJ (MSMg01no327_k17.g1)
ACC	AG444968	AG444969
length	735	731
length of high quality (start - end)	679 (52 - 730)	227 (79 - 305)
definition	CHROMAT_FILE: MSMg01no327_k17.b1 PHD_FILE: MSMg01no327_k17.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:12:37 2005	CHROMAT_FILE: MSMg01no327_k17.g1 PHD_FILE: MSMg01no327_k17.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:12:37 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	NNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XCGCGGAATTCAAGGCCCATACCTAAACATGATAAAAGCAATCTACAGCA AACCAGTAGCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCA CTAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAA CATAGTACTTGAAGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATCA AGGGGATACAAATTGGAAAAGAGGAAGTCAAAATATCACTTTTTGCAGAT GATATGATAGTATATATAAGTGACCCTAAAAATTCTACCAGAGAACTCCT AAACCTGATAAACAGCTTCGGTGAAGTAGCTGGATATAAAATAAACTCAA ACAAGTCAATGACCTTTCTCTATACAAAGAATAAACAGGCTGAGAAAGAA ATTAGGGAAATAACACCCTTCTCAATAGTCACAAATAATATAAACTATCT TGGCGTGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAAACTTCA AATCTCTGAAGAAAGAAATTAAGGAAGATCTCAGAAGATGGAAAGATCTC CCATGCTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCC AAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAAT TCTTCAACGAATTGGAAGGAGCAATTTGCAAATTN	NNNCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXCAGAGGTTGGTGAGAACAGATG GCAGAAGGACTGGTGGTTCCCAAGCTGGTTTAAAAATGGGTAAGGGATCA GGATGGGTTCCTAAGTCCCTGAAACCCACAGAGGACCCATGGCCTCCTCC CTCCCTTCTTCTGGCTCACTGGACTCACTCATGGAGTCTCCTCATTGCTG TTGTTGTTTTTGTTGTTGTTAGCTTCTATTGTTATTGTGGGGGGTGGGGA GTNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTNTTNNNNNNNNNTTTTT TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNTTTTTTNTTTTTTTTTT TTTTTTTNTTTTNTTTCCCCCCCCCCCNNNNNNTTNNTTTTTTTTTGTTT TTTCTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTCCCTTNTTTTTTCCC TCTTTTCTCCTCTCCTTTTCTCCGTCCTTTCTTCCTTTCTTCTTTTCCCT TTCCCTTTTTCTTCTTTCTCTTGTTTTTTTCCTCTCTCCTTCTTTTTTTT TTTTTTTTTTTCCCCTCTCTTCTTTTTTTTTCGTCCCTTTCCTTTTCTTT TTCTTTTCTCCTCCTTCTTTTTTTTCTCCTCTCCCCCCTTTTCTTTTTGT GCTCTCGCTTTTTTTTGTTCTTCTTTCCCCG
quality values	Open. Hide. 0 0 0 0 3 7 6 8 8 10 10 10 11 18 33 34 33 32 30 28 28 37 37 37 31 31 32 37 37 41 47 30 28 30 30 24 19 25 19 19 19 15 15 30 32 47 42 37 28 23 23 42 43 57 68 47 47 47 42 50 50 50 42 42 59 37 30 30 24 32 37 37 44 41 68 50 51 50 50 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 51 51 51 50 68 68 68 68 68 68 68 68 68 68 68 68 51 51 51 51 51 51 68 68 68 68 68 68 51 50 51 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 39 39 39 31 31 31 43 43 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 59 48 48 59 48 48 48 48 48 48 59 59 57 57 48 48 48 57 59 59 59 50 50 50 47 47 44 44 44 37 37 39 39 39 41 41 50 50 43 59 48 48 48 59 57 57 48 59 59 48 46 46 59 41 44 44 41 37 37 43 43 59 47 47 43 43 33 33 30 37 37 44 43 57 57 57 57 57 59 59 48 48 48 48 48 37 37 30 30 30 37 37 32 28 31 39 59 59 59 47 41 41 48 48 46 41 41 41 37 37 32 29 29 32 40 41 41 41 37 37 44 37 37 36 36 36 37 40 37 32 32 32 34 34 37 36 37 37 41 41 41 37 37 37 37 37 18 11 11 11 8 8 3 0	Open. Hide. 0 0 0 3 7 7 9 12 10 10 9 9 15 11 19 9 9 9 12 25 30 37 37 33 33 32 32 28 28 37 37 21 21 10 10 10 10 12 11 22 22 18 21 21 33 32 53 53 57 57 53 50 50 50 50 50 50 59 59 59 59 59 59 32 37 36 36 36 42 44 68 68 42 42 41 41 50 43 50 50 50 51 68 68 68 68 68 68 68 68 68 68 51 50 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 50 50 50 50 50 50 48 48 46 46 46 48 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 53 53 57 57 57 57 57 57 57 57 57 57 59 59 59 59 59 59 59 59 59 59 59 59 59 27 27 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 14 21 22 23 22 28 22 23 16 19 3 0 3 3 0 0 0 0 0 0 0 0 0 3 15 8 8 8 8 6 7 10 10 9 8 8 6 6 8 8 10 6 6 8 7 9 7 6 6 6 6 6 6 6 7 7 8 7 3 0 0 3 8 8 8 7 3 0 3 7 7 9 9 15 8 7 7 7 11 9 11 19 17 9 3 0 3 10 11 3 0 3 6 6 7 13 16 19 16 20 18 13 13 23 3 0 0 0 0 0 0 3 3 0 0 3 10 9 8 10 8 8 8 8 10 13 13 11 7 6 6 6 8 8 15 22 21 19 11 10 10 12 11 8 8 3 0 3 9 10 10 8 6 6 6 6 6 6 6 6 6 10 10 15 12 9 9 3 0 3 11 10 9 9 9 9 9 8 10 8 8 8 8 9 9 8 8 8 8 8 8 8 8 8 8 8 8 6 6 9 9 10 14 13 14 10 11 10 12 10 11 10 9 9 9 21 18 14 9 9 10 15 16 17 22 17 17 15 8 7 6 6 6 8 8 12 11 10 8 8 8 8 13 17 18 13 13 8 9 8 8 11 12 12 9 9 9 10 8 8 10 8 8 8 8 8 14 14 17 14 15 11 10 10 9 10 10 15 15 16 16 15 12 9 9 10 13 14 14 14 14 14 14 14 15 18 18 22 19 20 19 21 23 16 14 12 11 8 8 8 8 8 8 8 8 10 12 9 9 9 9 10 8 10 10 10 10 10 12 9 9 9 14 10 8 8 8 8 8 8 10 10 13 8 8 8 8 22 17 17 10 6 8 6 6 8 6 9 9 9 11 10 11 13 11 12 12 15 16 24 18 18 16 14 8 8 8 8 8 8 10 10 14 9 9 11 11 15 10 13 15 12 12 6 6 8 8 8 8 6 6 8 10 17 16 21 21 15 15

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no327_k17.g1 MSMg01no327_k17.g1 CHROMAT_FILE:
MSMg01no327_k17.g1 PHD_FILE: MSMg01no327_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:12:37 2005
         (227 letters)



>mm_chr2_35269434_35270060
          Length = 627

 Score =  426 bits (220), Expect = e-124
 Identities = 223/224 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagaggttggtgagaacagatggcagaaggactggtggttcccaagctggtttaaaaatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cagaggttggtgagaacagatggcagaaggactggtggttcccaagctggtttaaaaatg 307

                                                                       
Query: 61  ggtaagggatcaggatgggttcctaagtccctgaaacccacagaggacccatggcctcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ggtaagggatcaggatgggttcctaagtccctgaaacccacagaggacccatggcctcct 247

                                                                       
Query: 121 ccctcccttcttctggctcactggactcactcatggagtctcctcattgctgttgttgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ccctcccttcttctggctcactggactcactcatggagtctcctcattgctgttgttgtt 187

                                                       
Query: 181 tttgttgttgttagcttctattgttattgtggggggtggggagt 224
           ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 186 tttgttgttgttagcttctattgttattgtgaggggtggggagt 143


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 227
Length of database: 627
Length adjustment: 9
Effective length of query: 218
Effective length of database: 618
Effective search space:   134724
Effective search space used:   134724
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information