Query= MSMg01no330_h16.b1 MSMg01no330_h16.b1 CHROMAT_FILE:
MSMg01no330_h16.b1 PHD_FILE: MSMg01no330_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:11 2005
(315 letters)
>mm_chr2_35490407_35491121
Length = 715
Score = 563 bits (291), Expect = e-165
Identities = 306/311 (98%)
Strand = Plus / Minus
Query: 5 gaattcaagggtctgagagtagaggcaggtgacacacagtgagaaagcatgacgtcttct 64
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 493 gaattcaagggtctgagagtagaggcaggtgacacacagtgagagagcatgacgtcttct 434
Query: 65 caacactaacagtcccacatatacaggtgacaaaccattccctctgtgtctgtctaaaga 124
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 caacactaacagtaaaacatatacaggtgacaaaccattccctctgtgtctgtctaaaga 374
Query: 125 gaaacgaaatgaagagaaaaaataaaatataaaagaccaaatcaagactaacagcagctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gaaacgaaatgaagagaaaaaataaaatataaaagaccaaatcaagactaacagcagctt 314
Query: 185 acatggccatggcaaaactccaaagagcatggctctcaagtgggtgctagacacacctgg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 acatggccatggcaaaactccaaagagcatggctctcaagtgggtgctagacacacctgg 254
Query: 245 gccgtggcacgagaactgagcagagagcctggttgaagagttataggtctgtgtgtgtgt 304
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 253 gccgtggcacgagaactgagcagagagcctgggtgaagagttataggtctgtgtgtgtgt 194
Query: 305 gtgtgtgtgtg 315
|||||||||||
Sbjct: 193 gtgtgtgtgtg 183
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_h16.g1 MSMg01no330_h16.g1 CHROMAT_FILE:
MSMg01no330_h16.g1 PHD_FILE: MSMg01no330_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:12 2005
(284 letters)
>mm_chr2_35335406_35336090
Length = 685
Score = 468 bits (242), Expect = e-136
Identities = 272/282 (96%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 1 tttgcaggtaaatcaatcactcatgttcagagcccttctttttcctc-taattattgtct 59
||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 201 tttgcaggtaaatcaatcactcatgtttagagcccttctttttcctcataattattgtcc 260
Query: 60 atttctactttgtttactcctctgtaatcaggttgaacctctgtcctttttccctctcag 119
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 acttctactttgtttactcctctgtaatcaggttggacctctgtcctttttccctctcag 320
Query: 120 aattgtgtaaccagtcacaacactgagcagcacaagaggccaagagcacactaggagagg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattgtgtaaccagtcacaacactgagcagcacaagaggccaagagcacactaggagagg 380
Query: 180 aagtcactcactaaccaacatctccatcctcggggcctgggaggctacagaccacaggaa 239
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 aagtcactcactaaccgacatctccatcctcggggcctgggaggctacagaccacagaaa 440
Query: 240 aatgataatacagagttctgaggccagcactgggaggattag 281
||||| || |||||| ||||||||||||||||||||||||||
Sbjct: 441 aatgagaacacagagctctgaggccagcactgggaggattag 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 685
Length adjustment: 9
Effective length of query: 275
Effective length of database: 676
Effective search space: 185900
Effective search space used: 185900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
