Query= MSMg01no330_i20.b1 MSMg01no330_i20.b1 CHROMAT_FILE:
MSMg01no330_i20.b1 PHD_FILE: MSMg01no330_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:17 2005
(319 letters)
>mm_chr2_169272044_169272761
Length = 718
Score = 563 bits (291), Expect = e-165
Identities = 309/315 (98%), Gaps = 2/315 (0%)
Strand = Plus / Plus
Query: 5 gaattcattgctcatgacgactgttggaactccaaccatcacactgatacctaagaccag 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattgctcaagatgactgttggaactccaaccatcacactgatacctaagaccag 264
Query: 65 taagtgtgtagcttcatatctcacaggggagccagcaatgtgtattagcatcttgtaagt 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taagtgtgtagctttatatctcacaggggagccagcaatgtgtattagcatcttgtaagt 324
Query: 125 gctaagcaattcatttttttctttaagttttatattcttataggatgtatcattattagt 184
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gctaagcaattcatttttt-ctttaagttttatattcttataggatgtatcattattagt 383
Query: 185 cttctattaatatatgaaaaatgaagactaagtcagtaccttaaaacagtagaatgttat 244
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cttctattaatatatgaaaa-tgaagactaagtcagtaccttaaaacagtagaatgttat 442
Query: 245 aactcacagttcctgttggccaggaacgaggacatggtttaactgggctctatgaccagg 304
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 443 aactcacagttcctgttggccaggaacgaggacatggcttaactgggctctatgaccagg 502
Query: 305 gtctttgagagtgtc 319
|||||||||||||||
Sbjct: 503 gtctttgagagtgtc 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 718
Length adjustment: 9
Effective length of query: 310
Effective length of database: 709
Effective search space: 219790
Effective search space used: 219790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no330_i20.g1 MSMg01no330_i20.g1 CHROMAT_FILE:
MSMg01no330_i20.g1 PHD_FILE: MSMg01no330_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:17 2005
(274 letters)
>mm_chr2_169441521_169442194
Length = 674
Score = 443 bits (229), Expect = e-129
Identities = 244/249 (97%)
Strand = Plus / Minus
Query: 1 attctctttatcgagtgtggcgatatgtagaataaaacctgtaatattttgggacacaag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 436 attctctttatcgagtgtggcgatatgtagaataaaacctgtaatattttgggatacaag 377
Query: 61 atacgtaagagagaaaaaatgaaggctggaagtagatttgggttttcagagggaagggtt 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 atacgtaagagagaaaaaaggaaggctggaagtagatttgggttttcagagggaagggtt 317
Query: 121 gagaagtggttctcctcaattctcctagagagactctaaggaacaggcaacctccggctc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 316 gagaagtggttctcctcaattctcctagagagactctaaggaacaggcaacctctggctc 257
Query: 181 aaaggaaaggagaggatgttaaattagcttaaggaacaaaggaactacttcggctaccga 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 256 aaaggaaaggagaggatgttaaattagcttaaggaacaaaggaactacttcggctatgga 197
Query: 241 tcacttctt 249
|||||||||
Sbjct: 196 tcacttctt 188
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
