Query= MSMg01no331_e10.b1 MSMg01no331_e10.b1 CHROMAT_FILE:
MSMg01no331_e10.b1 PHD_FILE: MSMg01no331_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:09 2005
(364 letters)
>mm_chr2_42611112_42611874
Length = 763
Score = 644 bits (333), Expect = 0.0
Identities = 354/363 (97%), Gaps = 5/363 (1%)
Strand = Plus / Minus
Query: 4 ggaattcatatgagtg--acccagaaaactatgatagttaagctaattaacatgtatatt 61
||||||||||||| || | ||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ggaattcatatgaatgaaa---agaaaactatgatagttaagctaattaacatgtatatt 507
Query: 62 attgttctgcttactaaacttctgtgtttccaaaaacatcttacatttacttatttagac 121
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 506 attgttctgcttactaaacttctgtgtttccaaaaacatcttacatttactcatttagac 447
Query: 122 taaaattatagataacatttctttgccttaatctttatatcgtacattaattctggaatt 181
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 taaaattatagataacacttctttgccttaatctttatatcgtacattaattctggaatt 387
Query: 182 attctagacacttggtacttcgtgttctctgacctacttcccaatattccctgctcattc 241
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 386 attctagacacttggtacttcgtattctctgacctacttcccaatattccctgctcattc 327
Query: 242 tttctccaagtaaaaacattgatttatatctatgcatacttggatttttgaagatttcat 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tttctccaagtaaaaacattgatttatatctatgcatacttggatttttgaagatttcat 267
Query: 302 gtctcagactataattgttctgatttcagttagcacaatgtctaggctcatctatgtgtg 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gtctcagactataattgttctgatttcagttagcacaatgtctaggctcatctatgtgtg 207
Query: 362 gca 364
|||
Sbjct: 206 gca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 763
Length adjustment: 9
Effective length of query: 355
Effective length of database: 754
Effective search space: 267670
Effective search space used: 267670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no331_e10.g1 MSMg01no331_e10.g1 CHROMAT_FILE:
MSMg01no331_e10.g1 PHD_FILE: MSMg01no331_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:09 2005
(657 letters)
>mm_chr2_42453625_42454681
Length = 1057
Score = 1247 bits (645), Expect = 0.0
Identities = 654/657 (99%)
Strand = Plus / Plus
Query: 1 ctgttgtagaaattcagctttactttcaaatgtatgttttacttttacattcagatagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgttgtagaaattcagctttactttcaaatgtatgttttacttttacattcagatagta 260
Query: 61 aaattatgtttatgaagataaactgccttttattaggaatagaaccactcttccaagtat 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 aaattatgtttatgaagataaactgccttttattgggaatagaaccactcttccaagtat 320
Query: 121 aaaatagctgtccattttttttcaaaatatttgctggagatcagtatataaaacagaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaatagctgtccattttttttcaaaatatttgctggagatcagtatataaaacagaagt 380
Query: 181 gcttttgactcacaggcttgaagattttttgaaatgctaagagagaagcaatgataacgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttttgactcacaggcttgaagattttttgaaatgctaagagagaagcaatgataacgc 440
Query: 241 cttctcggcaggagtgtgtttgggagtgcagtttccttggttccctgctggatttcacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttctcggcaggagtgtgtttgggagtgcagtttccttggttccctgctggatttcacaa 500
Query: 301 atctttctctgcaaggaatttgtcttcaacaatgtcttgtctattacatctgcccagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atctttctctgcaaggaatttgtcttcaacaatgtcttgtctattacatctgcccagaag 560
Query: 361 gcctcagaaatgcttcattgctgatggtaggtcatatattctagaaaaactgggttggtt 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 561 gcctcagaaatgcttcattgctgatggtaggtcatatattctagaaaaactgggttagtt 620
Query: 421 taataataaagctaaaatatgcttgcctaaaagcttctttacagaacatattacccgaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taataataaagctaaaatatgcttgcctaaaagcttctttacagaacatattacccgaat 680
Query: 481 atttaaataacatcattatccagtgctttgagtaatatttttaatgggaaaaatctgact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atttaaataacatcattatccagtgctttgagtaatatttttaatgggaaaaatctgact 740
Query: 541 agaaatacatagagtattgactgtagtcataacatcacattttctcctctgctagagttc 600
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 741 agaaatacatagagtattgactctagtcataacatcacattttctcctctgctagagttc 800
Query: 601 ccacctgcatgagagatgagacgtgctttacctccacaacagacccaaaccatacca 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ccacctgcatgagagatgagacgtgctttacctccacaacagacccaaaccatacca 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
