Query= MSMg01no331_i06.b1 MSMg01no331_i06.b1 CHROMAT_FILE:
MSMg01no331_i06.b1 PHD_FILE: MSMg01no331_i06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:25 2005
(680 letters)
>mm_chr2_59783243_59784323
Length = 1081
Score = 536 bits (277), Expect = e-156
Identities = 344/389 (88%), Gaps = 40/389 (10%)
Strand = Plus / Plus
Query: 329 cccagccactacccttaatacatacatgtatacaaaaaagaaagtgctgcatgtttggtt 388
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 496 cccagccactacccttaatacatacatgtatacaaaat-gaaagtgctgcatgtttgttt 554
Query: 389 tcatgtagagagagaatacacacacacacaca-a-------------------------- 421
|||||||||||||||||||||||||||||||| |
Sbjct: 555 tcatgtagagagagaatacacacacacacacacacacacacacacacacacacacacaca 614
Query: 422 -------aggtaaaagtgaagcccattacaa---gagggaaataaatcatggaataaaat 471
|||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct: 615 cacacacaggtaaaagtgaagcccattacaacaagagggaaataaatcatggaataaagt 674
Query: 472 caatttgaaatctaggagaataaaatacaattagtttctttgttacaatacacctgattt 531
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 675 caatttgaaatctaggagaataaaatataattagtttctttgttacaatacacctgattt 734
Query: 532 ttcaaatttaaatgttctatttttgaatgtacatgagaatacatgtattagaaatgaaaa 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 ttcaaatttaaatgttctatttttgaatgtacatgagaatacatgtattagaaatgaaaa 794
Query: 592 cataagaaaagttaacattttgtctaccaattaacttcaagcactcatttttttgaatac 651
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 795 cataagaaaagttaacattt-gtctaccaattaacttcaagcactcattttttt-aatac 852
Query: 652 aataaggctgccattatacaagcttcaga 680
||||||||| |||||||||||||||||||
Sbjct: 853 aataaggctaccattatacaagcttcaga 881
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 680
Length of database: 1081
Length adjustment: 10
Effective length of query: 670
Effective length of database: 1071
Effective search space: 717570
Effective search space used: 717570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no331_i06.g1 MSMg01no331_i06.g1 CHROMAT_FILE:
MSMg01no331_i06.g1 PHD_FILE: MSMg01no331_i06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:25 2005
(652 letters)
>mm_chr2_59952114_59953165
Length = 1052
Score = 772 bits (399), Expect = 0.0
Identities = 426/435 (97%), Gaps = 1/435 (0%)
Strand = Plus / Minus
Query: 1 caagatccgattatctctacctccccagtgctgggatttaccccaccactgcctgacgtc 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 434 caagatccgattatctctacctccccagtgcagggatttaccccaccactgcctgacgtc 375
Query: 61 taacaattagttttatcttttcgaagaatcagatttgggtttgtctcctttctggtttgg 120
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 374 taacaattagttttatctttttgaagaatcagatttgagtttgtctcctttctggtttgg 315
Query: 121 ggctgctgatgtctgcgccaccatgcccagcccactttcttgccttatttaaggagtgcc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ggctgctgatgtctgcgccaccatgcccagcccactttcttgccttatttaaggagtgcg 255
Query: 181 gggaagtcactgtgtagctagctctagtggccttggagtctcagcccgcctcccagctcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gggaagtcactgtgtagctagctctagtggccttggagtctcagcccgcctcccagctcg 195
Query: 241 gccttctgcctgctgggattacaggtgtgtgccattcccagtgtgtctcatggcgtgctt 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 gcc-tctgcctgctgggattacaggtgtgtgccattcccagtgtgtctcatggcgtgctt 136
Query: 301 tgcatctagattccgtataggagttagactgtggtgattcttctgcccttactttacttg 360
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 135 tgcatctagattccgtataggagttagactgtggtgattcttctgggtttactttatttg 76
Query: 361 acgtagtgcagtctcagttctagccactttcctgtaagtgacacgactctgttctttata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 acgtagtgcagtctcagttctagccactttcctgtaagtgacacgactctgttctttata 16
Query: 421 actcaagaatgcatc 435
|||||||||||||||
Sbjct: 15 actcaagaatgcatc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
