GTGTGGTCTCGGGCGGGGGTNCAGTGCCGACCCTCCACCCAATATAGTGT
GGTGATCTATAATTGCGGNCGCTAAANGAATCACTATTTCGNTTACGCNA
GGNGAANNANNNATTTACCNGTAGTAAAGGANANAGGGGGAANANNNANN
ANGNGNNANNNANANGGGGNTAGACCGANNAAAAGANAANANANNAAGAA
GAAAAAGAGAAANNGGGGAGNNNNNNANNGGNANANGGGANNAGAAANAN
ANGGGGGAGANANNAANGANNAANNNGGNNNANAGNNANNNAANANNAGG
GGAGGATAGANAAANANANNNANAAGAANNNAAGGAGGNANNAGGGANAG
AGGAANAGGGGGAAAAAAAGTTTTTTTTTATTANATAAGANNATTTGGAN
ATNTAGGNAAAGAAGAAATGTGGCAAAAAAGANATAATGAAATGTTTAAG
TAAGTTAAGAATAGGATGGCTCTTTTGANTGTTTTTATATTGTATGGTAT
TGAGTATGAATGGNTTGATATTATATGNAGTTTCCTTTGTTGTTGTGATA
TAATACTCTGGACAAAAGCAATTTAGAGGAGGAAAGGATTTATCTGGCTT
GTACTTTTAGGTTAAAGGTCGTCAATGAAAGTCATACCATTAATTGGAAT
GCATGAACCTTAGTGTGACACTTGCTATTTATGACATACAAGAATTCGTT
CTAAGTTTCCATATATTTTTTTTTATCACAGTTAAAGGTAGAAGAGAAGA
CAAATTCCTAACCACTATGATCACCATTTATAN

TGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXATCATGACCAGGCAACAGCATACAGGTTTGA
GAGGGACCATGGAGAAAAGGAGAGGTCTTCTTTCCTTGCCTTTAAAACAA
GGAGTCTTAGATTTTCATTTATCACCTACTATTGCAGACAGTACAGCTAA
TAATAAGTAAGGAAACAACACAATAAAGTGGCCCAGTGCTTTAGATGCTA
GTTTTGTTGCCTAATGTAGATAAAAATACCAACATCGTAAAGCAGAGTGG
TGGAGGCAAGAGATGTCATTGTCTTAGGAGAGCTCGGCTGACCTGCCTTC
TACTGAGATTAAGAGTCTAAATGCTGAACATTACACCACACCCAAGCTGA
GAAAGTAAAAGACATTAGCTAGGACGCCTGCAGATCTTTTAGAATAGGAG
GGACCATGTAGAAAATCAGAAAGACAAGAGGGGATGCTAGAATATTCATC
AAAGTCTATACAATCCTAAGTGTTTTGATTGAACCAAAGGAATTTGTTGT
AGCATTGGAAGAGTCTATTAAATATATGTGTGTTGTTATAACAATTTGTA
CACTATTTATTGTTAATGATTCCATTTTTACAACCACGTACTGAAAAAGA
CAATAGGGCACTTCATATTTCACATGGTAACTTTTTCAAATCTGAGGGAG
AAATGCATGGAAAAGGAGAGATAGTGAGGT

Query= MSMg01no331_i07.g1 MSMg01no331_i07.g1 CHROMAT_FILE:
MSMg01no331_i07.g1 PHD_FILE: MSMg01no331_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:26 2005
         (624 letters)



>mm_chr2_116424412_116425435
          Length = 1024

 Score = 1176 bits (608), Expect = 0.0
 Identities = 620/624 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaccaggcaacagcatacaggtttgagagggaccatggagaaaaggagaggtcttcttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaccaggcaacagcatacaggtttgagagggaccatggagaaaaggagaggtcttcttt 260

                                                                       
Query: 61  ccttgcctttaaaacaaggagtcttagattttcatttatcacctactattgcagacagta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttgcctttaaaacaaggagtcttagattttcatttatcacctactattgcagacagta 320

                                                                       
Query: 121 cagctaataataagtaaggaaacaacacaataaagtggcccagtgctttagatgctagtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagctaataataagtaaggaaacaacacaataaagtggcccagtgctttagatgctagtt 380

                                                                       
Query: 181 ttgttgcctaatgtagataaaaataccaacatcgtaaagcagagtggtggaggcaagaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgttgcctaatgtagataaaaataccaacatcgtaaagcagagtggtggaggcaagaga 440

                                                                       
Query: 241 tgtcattgtcttaggagagctcggctgacctgccttctactgagattaagagtctaaatg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtcattgtcttaggagagctcggctgacctgccttctactgagattaagagtctaaatg 500

                                                                       
Query: 301 ctgaacattacaccacacccaagctgagaaagtaaaagacattagctaggacgcctgcag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 ctgaacattacaccacacccaagctgagaaagtaaaagacattagctaggatgcctgcag 560

                                                                       
Query: 361 atcttttagaataggagggaccatgtagaaaatcagaaagacaagaggggatgctagaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atcttttagaataggagggaccatgtagaaaatcagaaagacaagaggggatgctagaat 620

                                                                       
Query: 421 attcatcaaagtctatacaatcctaagtgttttgattgaaccaaaggaatttgttgtagc 480
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 621 attcatcaaagtctatacaatcctaagtgttttgattgaaccaaaagaatttgttgtagc 680

                                                                       
Query: 481 attggaagagtctattaaatatatgtgtgttgttataacaatttgtacactatttattgt 540
           |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct: 681 attggaagagtctattaaatatatttgtattgttataacaatttgtacactatttattgt 740

                                                                       
Query: 541 taatgattccatttttacaaccacgtactgaaaaagacaatagggcacttcatatttcac 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taatgattccatttttacaaccacgtactgaaaaagacaatagggcacttcatatttcac 800

                                   
Query: 601 atggtaactttttcaaatctgagg 624
           ||||||||||||||||||||||||
Sbjct: 801 atggtaactttttcaaatctgagg 824


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space:   622596
Effective search space used:   622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)