Query= MSMg01no332_k18.b1 MSMg01no332_k18.b1 CHROMAT_FILE:
MSMg01no332_k18.b1 PHD_FILE: MSMg01no332_k18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:19:22 2005
(584 letters)
>mm_chr2_78989831_78990814
Length = 984
Score = 1122 bits (580), Expect = 0.0
Identities = 583/584 (99%)
Strand = Plus / Plus
Query: 1 tacctcactgtgacactaccattcctgacctgggactcctcatatctatgagatttattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tacctcactgtgacactaccattcctgacctgggactcctcatatctatgagatttattt 260
Query: 61 aaatgtaattctttagcttgtgagttgcgaatacccacaattcactcctcacctaaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatgtaattctttagcttgtgagttgcgaatacccacaattcactcctcacctaaaaat 320
Query: 121 actggctttgcttcatttcccatgaccatatctttgacacattgagtcatagttcctata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actggctttgcttcatttcccatgaccatatctttgacacattgagtcatagttcctata 380
Query: 181 ggtttctagtttattgatcttattctttaatgttagccaccaaggtaagtcacttaatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtttctagtttattgatcttattctttaatgttagccaccaaggtaagtcacttaatag 440
Query: 241 attcaactagcctttggaaatattgaagcacgtagatgccacattatttttatgaagatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attcaactagcctttggaaatattgaagcacgtagatgccacattatttttatgaagatt 500
Query: 301 acaaagccaatgaccccctgttggacttagctttccacagtcagaggaagtaattaattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaaagccaatgaccccctgttggacttagctttccacagtcagaggaagtaattaattt 560
Query: 361 ataaaagtggccactcttcaattcttatagtcctgaaatggttccattgatagggcagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ataaaagtggccactcttcaattcttatagtcctgaaatggttccattgatagggcagaa 620
Query: 421 tgaatggtttactaggagtgtattaaagagagaccagctactattaacttcagtactgtt 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 621 tgaatggtttactaggagtgtattaaagagagaccaactactattaacttcagtactgtt 680
Query: 481 acattgttacaaaagattcacaatcatgtttcacacaatgtttagatttatagggaactc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acattgttacaaaagattcacaatcatgtttcacacaatgtttagatttatagggaactc 740
Query: 541 ctgaaactatgcaggagtagcttgtgagctttaaactctgatca 584
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ctgaaactatgcaggagtagcttgtgagctttaaactctgatca 784
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 584
Length of database: 984
Length adjustment: 10
Effective length of query: 574
Effective length of database: 974
Effective search space: 559076
Effective search space used: 559076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no332_k18.g1 MSMg01no332_k18.g1 CHROMAT_FILE:
MSMg01no332_k18.g1 PHD_FILE: MSMg01no332_k18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:19:22 2005
(683 letters)
>mm_chr2_79152467_79153548
Length = 1082
Score = 1274 bits (659), Expect = 0.0
Identities = 677/683 (99%), Gaps = 1/683 (0%)
Strand = Plus / Minus
Query: 1 cagaaatgcttcaacgtcctggcaactacaatatgcaggtcactagagatctggagacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 cagaaatgcttcaacgtcctggcaactacaatatgcaggtcactagagatctggagacat 823
Query: 61 acaggccttagaaaagcatcctgcctttagggatagaatttcaatgagtttggctaggcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 acaggccttagaaaagcatcctgcctttagggatagaatttcaatgagtttggctaggcc 763
Query: 121 ttggccactcaatctgtaataatggtaaaatgactcttcagtgaagttttggatcaagcg 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 ttggccacccaatctgtaataatggtaaaatgactcttcagtgaagttttggatcaagcg 703
Query: 181 catcccatgaaatccctagaatatgaggaacttggagcataatgaaaatgctgaaacgca 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 702 catcccatgaaatccctagaatatgaggaacttggagcataatgaaaatgctgaaacgta 643
Query: 241 cagagctagaataatccaaacctttaagccctgtgctcatctctgtggtgcacagtgtcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 cagagctagaataatccaaacctttaagccctgtgctcatctctgtggtgcacagtgtcg 583
Query: 301 tcttctccaggcaggaaaaacaacaaaccctcataactttcagttactgtatgttttgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tcttctccaggcaggaaaaacaacaaaccctcataactttcagttactgtatgttttgat 523
Query: 361 tttctaagctttccccagagtcatctagtaattccaaaattagaaaaaaaaatggattaa 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 522 tttctaagctttccccagagtcatctagtaattccaaaattag-aaaaaaaatggattaa 464
Query: 421 ttaattcaaactggagcaggacgtgtgccaaaggaaccaggtggagactgtctaacaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ttaattcaaactggagcaggacgtgtgccaaaggaaccaggtggagactgtctaacaaca 404
Query: 481 ggatgtgtaaaaggatacgtaagaacacattaagatctctgatttaaagtcatgcttgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 403 ggatgtgtaaaaggatacgtaagaacacattaagatctctgatttaaagtcatgcttaga 344
Query: 541 gatgcataatcactgagcaaaactgagggtcccaggcagtgagtcggccactatgttgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gatgcataatcactgagcaaaactgagggtcccaggcagtgagtcggccactatgttgtt 284
Query: 601 tcatcacaaagcatgtttttaaagttcatttacccacctccccaaaaaagatagaagacc 660
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 283 tcatcacaaagcatgttgttaaagttcatttacccacctcccccaaaaagatagaagacc 224
Query: 661 catttccaaacaactggaaataa 683
|||||||||||||||||||||||
Sbjct: 223 catttccaaacaactggaaataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1082
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1072
Effective search space: 721456
Effective search space used: 721456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
