Query= MSMg01no333_f10.b1 MSMg01no333_f10.b1 CHROMAT_FILE:
MSMg01no333_f10.b1 PHD_FILE: MSMg01no333_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:29 2005
(341 letters)
>mm_chr2_119450825_119451565
Length = 741
Score = 652 bits (337), Expect = 0.0
Identities = 340/341 (99%), Gaps = 1/341 (0%)
Strand = Plus / Plus
Query: 1 cctgaaa-agatctacctgtctctgcctcctagtgctggcatttaaggttctagccatca 59
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 cctgaaacagatctacctgtctctgcctcctagtgctggcatttaaggttctagccatca 259
Query: 60 cacctggcccatttgctttctaattaatattccctgttgtttcaaggctttctatcctga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 cacctggcccatttgctttctaattaatattccctgttgtttcaaggctttctatcctga 319
Query: 120 acttatttggggccagttcatgggtgtacaggtctctcaggatgctctcccttccccttc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 acttatttggggccagttcatgggtgtacaggtctctcaggatgctctcccttccccttc 379
Query: 180 cctctgccctcttgcagtgcccttggtttgtgttccccatcaactcttcagttctctaag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cctctgccctcttgcagtgcccttggtttgtgttccccatcaactcttcagttctctaag 439
Query: 240 atttgcgtgaactttgcgtcacttgagattattcttcctctgcagtacttcacttctgtg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 atttgcgtgaactttgcgtcacttgagattattcttcctctgcagtacttcacttctgtg 499
Query: 300 taaagttgatttgtttattttcatatgattaatatgagtgt 340
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 taaagttgatttgtttattttcatatgattaatatgagtgt 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no333_f10.g1 MSMg01no333_f10.g1 CHROMAT_FILE:
MSMg01no333_f10.g1 PHD_FILE: MSMg01no333_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:30 2005
(339 letters)
>mm_chr2_119609312_119610050
Length = 739
Score = 580 bits (300), Expect = e-170
Identities = 303/304 (99%)
Strand = Plus / Minus
Query: 36 atctacctgcctttgcctcccaagtgctgggatcaaaggtgtgcgccaccatgccccact 95
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 atctacctgcctttgcctcccaagtgctgggatcaaaggtgtgcgccaccatgccccact 680
Query: 96 cttgtttgttttttgacacagggttttatgtacttcaggctggcttttaaacttaccata 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 cttgtttgttttttgacacagggttttatgtacttcaggctggcttttaaacttaccata 620
Query: 156 tagccaagggtaacctggaactttctaccctcttgctttttaccccaagtgctgggggtt 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tagccaagggtaacctggaactttctaccctcttgctttttaccccaagtgctgggggtt 560
Query: 216 atagacaggtgcacccgccctcgcgttggctgtaaataagtttactagactgatggccag 275
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 atagacaggtgcagccgccctcgcgttggctgtaaataagtttactagactgatggccag 500
Query: 276 agagggctgatagagaaagaaatgccagtgagctcacatcaatgcatggaaaagataaag 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 agagggctgatagagaaagaaatgccagtgagctcacatcaatgcatggaaaagataaag 440
Query: 336 acca 339
||||
Sbjct: 439 acca 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 739
Length adjustment: 9
Effective length of query: 330
Effective length of database: 730
Effective search space: 240900
Effective search space used: 240900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
