Query= MSMg01no335_c16.b1 MSMg01no335_c16.b1 CHROMAT_FILE:
MSMg01no335_c16.b1 PHD_FILE: MSMg01no335_c16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:50 2005
(474 letters)
>mm_chr2_33910111_33910987
Length = 877
Score = 891 bits (461), Expect = 0.0
Identities = 472/477 (98%), Gaps = 3/477 (0%)
Strand = Plus / Minus
Query: 1 taagaacattatcttccaggatgaaatgagatgcacagggggaaggcatagtgggacact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 taagaacattatcttccaggatgaaatgagatgcacagggggaaggcatagtgggacact 618
Query: 61 cactctggaacaaggggagccaggctgaaaggacagagccaacagggctcttgggagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 cactctggaacaaggggagccaggctgaaaggacagagccaacagggctcttgggagaaa 558
Query: 121 ccttagaatgctaaggctgatgttgtgaactccagaagtttctgagggtggaa---gggg 177
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 557 ccttagaatgctaaggctgatgttgtgaactccagaagtttctgagggtggaaggggggg 498
Query: 178 ggtccttgtgatcagtgggagacactgaggcatcagggtacagaggatggacatgcatgt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ggtccttgtgatcagtgggagacactgaggcatcagggtacagaggatggacatgcatgt 438
Query: 238 aaatcccagaagttccagatatttgctgtgcaatctcagaaagtcccttaatctccagtt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aaatcccagaagttccagatatttgctgtgcaatctcagaaagtcccttaatctccagtt 378
Query: 298 aattatgtccgcatttctgatgtttaaaaactaaaaagacttggcttgggagacactacc 357
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 aattatatccgcatttctgatgtttaaaaactaaaaagacttggcttgggagacactacc 318
Query: 358 tgagtatttgatgtttgttaggtgacagttgagagcgatagcaccttgggtttatgcagc 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tgagtatttgatgtttgttaggtgacagttgagagcgatagcaccttgggtttatgcagc 258
Query: 418 acccactagagttgaaaggatacctcgtcctgtgagtcaggctcagtgtgaggtgga 474
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 257 acccactagagttgaaaggatacctcatcctgtgagtcaggctcagtgtgaggtgga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 877
Length adjustment: 10
Effective length of query: 464
Effective length of database: 867
Effective search space: 402288
Effective search space used: 402288
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no335_c16.g1 MSMg01no335_c16.g1 CHROMAT_FILE:
MSMg01no335_c16.g1 PHD_FILE: MSMg01no335_c16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:50 2005
(442 letters)
>mm_chr2_33717012_33717853
Length = 842
Score = 847 bits (438), Expect = 0.0
Identities = 441/442 (99%)
Strand = Plus / Plus
Query: 1 ttcagctacctctcattagaagtcactgtgcccagaatgaagggcccaccatttttcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcagctacctctcattagaagtcactgtgcccagaatgaagggcccaccatttttcaac 260
Query: 61 tcagaactctactttcaggaaaggagagaaaaccaaggcaaatctcagaaagaagaaaac 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 tcagaactctactttcaggaaaggagagaaaatcaaggcaaatctcagaaagaagaaaac 320
Query: 121 aaagttaataaaaacaagtaattatgggtttccttctcctgaatctcctcagtcacgggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagttaataaaaacaagtaattatgggtttccttctcctgaatctcctcagtcacgggc 380
Query: 181 gatgtagtgacggcagagaaccacgtggcattaagggtatgtgcaggagacactcaagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatgtagtgacggcagagaaccacgtggcattaagggtatgtgcaggagacactcaagat 440
Query: 241 gctctgtgttattaatgaaggctggggaaggagatggctgccctgcatttcacttggaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctctgtgttattaatgaaggctggggaaggagatggctgccctgcatttcacttggaaa 500
Query: 301 ctggtaaaatgatattggtagatatttatagtataaaacccagtacaaagagcaaccact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctggtaaaatgatattggtagatatttatagtataaaacccagtacaaagagcaaccact 560
Query: 361 caaaacacttcaataagccaaaataggatccttaacaaatgttcaattcatccaaaagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caaaacacttcaataagccaaaataggatccttaacaaatgttcaattcatccaaaagaa 620
Query: 421 aacagaaacaaaaacagactaa 442
||||||||||||||||||||||
Sbjct: 621 aacagaaacaaaaacagactaa 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
