NCCTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTTTGAATTCCTTTTGAATACCATGCCACCATCATCAATGTT
AAATCCTAACATTTTCTGTGAGCTTCTCTTAATTGCATTACATTCCTATG
TGTATACTTTCTATGTTTGCCATCCATAAGCATCTATATTACACAGCCTC
CAGTTCTACATGAATGCTTCTGAATATTACAGAAAGCGACGACACAATCT
TATCAACTCCTCTTTTCTACAAGTTAGTCATGTGTAAGCATATTTGTCAA
CTAGCAAACATCAGTTTGTCTTCTCCATCATATATTTGATCACCTATGAG
GTTCCGTTGTTTCATTGGTAATTTATTTTATATTTTTGTGTTGTTTTTGA
ACAGGTTTATAGGATAGTTTTACAGATGCCCAAGAAACACAGAAGAAGGT
ATAAGTCAGGTCATTCATCTTAATCTTTGTATGTCTCAAGACCACTTTTA
AAGGTTGTTTTGCCAACAGTGACCTTGACACTTGTTTTTCCCTGTAATGA
ATAAGTCATTCCTGAGCATCTGGTCTCCTCTTGGATGTGATGCTTTCAAT
GGCCCTTTCCTAATGCTGCTTCACTTTATTGTTTTCTTGGCTTACAAAGC
AAACTTACAGGACCAACAAATGCATCACATCCATGACAGTCTTGTGCTCA
CTGTTTCAGCCAAGACCACACCAGAGGAAAATAGAGACCN

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCCCCTGAGGAATACCGAATGGCAGA
GAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAA
TCAAAACAACCCTAAGATTCCACCTCACACCAGTCAGAATGTCTAAGATC
AAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAAC
ACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAAT
CCGTCTGGCGGTTCCTCAGAATATTGGACATAGTACTACCGGAGGATCCA
GCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAA
GGACACATGCTCCACTATGTTCATAGCAGCATTATTTATAATAGCCAGAA
GCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATA
TGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATT
TATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTG
AGGTAACACATTCCCATAGGAACTCACACAATATGTACTCACTGATAAGT
GGATATTATCCCCCACACCTAGGATACCCTTGTATATCCCTATTTTTTTC
TTTTCTCCCTTGATTCTTCCCCACCTATTGAATACTTGAATTGTG

Query= MSMg01no335_m16.b1 MSMg01no335_m16.b1 CHROMAT_FILE:
MSMg01no335_m16.b1 PHD_FILE: MSMg01no335_m16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:40 2005
         (589 letters)



>mm_chr2_40189268_40190257
          Length = 990

 Score = 1079 bits (558), Expect = 0.0
 Identities = 582/590 (98%), Gaps = 1/590 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   taccatgccaccatcatcaatgttaaatcctaacattttctgtgagcttctcttaattgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 taccatgccaccatcatcaatgttaaatcctaacattttctgtgagcttctcttaattgc 731

                                                                       
Query: 61  attacattcctatgtgtatactttctatgtttgccatccataagcatctatattacacag 120
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 730 attacattcctatgtgtatactttctatgtttgccatccataagcatttatattacacag 671

                                                                       
Query: 121 cctccagttctacatgaatgcttctgaatattacagaaagcgacgacacaatcttatcaa 180
            ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 670 tctccagttctacatgaatgcttctgaatattacagaaagcgacaacacaatcttatcaa 611

                                                                       
Query: 181 ctcctcttttctacaagttagtcatgtgtaagcatatttgtcaactagcaaacatcagtt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 610 ctcctcttttctacaagttagtcatgtgtaagcatatttgtcaactagcaaacatcaatt 551

                                                                       
Query: 241 tgtcttctccatcatatatttgatcacctatgaggttccgttgtttcattggtaatttat 300
           |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 550 tgtcttctccatcatatatttgattacctatgaggtttcgttgtttcattggtaatttat 491

                                                                       
Query: 301 tttatatttttgtgttgtttttgaacaggtttataggatagttttacagatgcccaagaa 360
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 490 tttatatttttgtgttgttttttaacaggtttataggatagttttacagatgcccaagaa 431

                                                                       
Query: 361 acacagaagaaggtataagtcaggtcattcatcttaatctttgtatgtctcaagaccact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 acacagaagaaggtataagtcaggtcattcatcttaatctttgtatgtctcaagaccact 371

                                                                       
Query: 421 tttaaaggttgttttgccaacagtgaccttgacacttgtttttccc-tgtaatgaataag 479
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 370 tttaaaggttgttttgccaacagtgaccttgacacttgtttttcccttgtaatgaataag 311

                                                                       
Query: 480 tcattcctgagcatctggtctcctcttggatgtgatgctttcaatggccctttcctaatg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tcattcctgagcatctggtctcctcttggatgtgatgctttcaatggccctttcctaatg 251

                                                             
Query: 540 ctgcttcactttattgttttcttggcttacaaagcaaacttacaggacca 589
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ctgcttcactttattgttttcttggcttacaaagcaaacttacaggacca 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 990
Length adjustment: 10
Effective length of query: 579
Effective length of database: 980
Effective search space:   567420
Effective search space used:   567420
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)