Query= MSMg01no336_l20.b1 MSMg01no336_l20.b1 CHROMAT_FILE:
MSMg01no336_l20.b1 PHD_FILE: MSMg01no336_l20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:53 2005
(543 letters)
>mm_chr2_120231352_120232294
Length = 943
Score = 1042 bits (539), Expect = 0.0
Identities = 539/539 (100%)
Strand = Plus / Minus
Query: 5 gaattccttctgggtgaagtatttacttacctgtagaatgcaatcttgccacagtctttg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gaattccttctgggtgaagtatttacttacctgtagaatgcaatcttgccacagtctttg 684
Query: 65 aaaatagttttatccactgcttcatcttcaacactaaatcagaagacattttaaagaaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aaaatagttttatccactgcttcatcttcaacactaaatcagaagacattttaaagaaat 624
Query: 125 atattttacataagaattgtgagctcaatttttgtaccttccctaatgatggtacaaatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atattttacataagaattgtgagctcaatttttgtaccttccctaatgatggtacaaatg 564
Query: 185 tttggaacttattctgtacccaaaactgtgtcactgctgtaacataagacttcatggggt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tttggaacttattctgtacccaaaactgtgtcactgctgtaacataagacttcatggggt 504
Query: 245 gacagaatgtgagctgcagaacaatatccttttgtaaaactaccaacatgaattacaaaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gacagaatgtgagctgcagaacaatatccttttgtaaaactaccaacatgaattacaaaa 444
Query: 305 tagtttcataggcgtggtctgaaggctatgggaaaggaggaaggcacttttaagataata 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tagtttcataggcgtggtctgaaggctatgggaaaggaggaaggcacttttaagataata 384
Query: 365 gccacaacaccaaaacctgaactctcaaccaagccaaacaagcaacttactctcctattt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gccacaacaccaaaacctgaactctcaaccaagccaaacaagcaacttactctcctattt 324
Query: 425 aaagagcaaaatattttcaggacatatacttccagagagtttagacctgaagacacagtg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aaagagcaaaatattttcaggacatatacttccagagagtttagacctgaagacacagtg 264
Query: 485 tacctaaatgttctattaaagtctaacatacaactgcaagataaggctccgaatccttt 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tacctaaatgttctattaaagtctaacatacaactgcaagataaggctccgaatccttt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space: 497289
Effective search space used: 497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no336_l20.g1 MSMg01no336_l20.g1 CHROMAT_FILE:
MSMg01no336_l20.g1 PHD_FILE: MSMg01no336_l20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:53 2005
(493 letters)
>mm_chr2_120077271_120078163
Length = 893
Score = 946 bits (489), Expect = 0.0
Identities = 492/493 (99%), Gaps = 1/493 (0%)
Strand = Plus / Plus
Query: 1 cagaacagccagggctatacagagaaaccctggtctcgagaaaacaaaagcaaaaacaaa 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 202 cagaacagccagggctatacagagaaaccctg-tctcgagaaaacaaaagcaaaaacaaa 260
Query: 61 aacaaaacaaaaaccaaccaaccaaccaaacaaacaaacaaaaacttcaaggagatccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacaaaacaaaaaccaaccaaccaaccaaacaaacaaacaaaaacttcaaggagatccat 320
Query: 121 actatcagaatgcttaagcatttctggacttacctcgtggcccactgaatcgcttagctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actatcagaatgcttaagcatttctggacttacctcgtggcccactgaatcgcttagctg 380
Query: 181 cataggtagtggtattttggaggctgaggactcactatacaagtgtttcttccaggggta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cataggtagtggtattttggaggctgaggactcactatacaagtgtttcttccaggggta 440
Query: 241 gatgttccattttaaaactcacacgtatgaaaatatctccacaatagtgttgtagttgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gatgttccattttaaaactcacacgtatgaaaatatctccacaatagtgttgtagttgtt 500
Query: 301 aaaatgagctactgataatagtgtcacccaagaagagcctcttgtctggagtctttgtaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaatgagctactgataatagtgtcacccaagaagagcctcttgtctggagtctttgtaa 560
Query: 361 gcagcaagactgggtttgagaaagtacagttggtgagttataggggaaaacaaagtttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcagcaagactgggtttgagaaagtacagttggtgagttataggggaaaacaaagtttca 620
Query: 421 ggcatctctcagaaggagctcagactctctgaaactggtttggtttgaaaagggctgaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggcatctctcagaaggagctcagactctctgaaactggtttggtttgaaaagggctgaaa 680
Query: 481 gtagctccccagg 493
|||||||||||||
Sbjct: 681 gtagctccccagg 693
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 893
Length adjustment: 10
Effective length of query: 483
Effective length of database: 883
Effective search space: 426489
Effective search space used: 426489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
