XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCC
CTCATGTACGCAGCTCAGTCAAGGTACTTCAGTGTTCAGCAAGGCATCTT
TCATGAAGAATGCCATCCTAAAACACTAACAACACTTAGCATCTATAGTA
AGAAACCTGTAATCCCTGAAGGCCAGAGATATCTCACCAGTTCCAACTGC
AATTAGAGCAGTGGGCTAGTCCACCGACCTATTACATGAACAAGTCTCAC
ATCTGTGAGAAGTTTGCATATTTTGGACTTGGATATGGATATTTTCTTTG
GATATATTCCCAAATCTTTCTGACAAAAGCCAGTTATAAGGCCTGGGTTT
ACCTCAAGTTGTCCAGGAAGGTGTGGGTAGGCCTCACAAGTTTGGTTCTT
ACAGGAGTGATTATCATTATTTTCTATCAGATAATCATAGATAAGTAAGT
TAATATTTAGATGTGTGTTACAATTATGTTTGGCCAGTTATAATGCTGCA
AATGCATACTGGACAGGAAATGAAAAGCAAGACATGAGAATAGACATCTC
TTGAAAACTACAAATCTTCAGGCTGGGAAACAGAAAAAATAGAATAAAAA
TGGGTCTAGCTTACCACATATATTGATAGCTTATATNAAACATTCAGTGC
TTGTAAGATGTGGTTGACTGCTATGCACATTTTACATCATTTCCTGTTCC
ACTGACCAGATTAAAAGACTATCGGCATCTTCCACAGAACTGAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTTGTTCAGCTCTGAGCCCCATTTTTTAATGG
GGTTATTTGATTTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTG
GATATTAGTCCCCTATCCGATTTGGGATAGGTAAAGATCCTTTCCCAATC
TGTTGGTGGCCTTTTTGTCTTATTGATGGTGTCTTTTGCTTTGCAGAAAC
TTTGCAATTTTATGAGGTCCCATTTATCGATTCTTGATCTTAGAGCACAA
GCCATTGCTGTTCTATTCAGGAATTTTTCCCCTGTACCCATATCTTCAAG
GCTTTTCCCTACTTTCTCCTCTATACGTTTCAGTGTCTCTGGTTTTATGT
GGAGTTAGAAACACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAA
ATGCAAATCAAAACAACACTGAGATTCCACTTCACTCCAGTCAGAATGGC
TAAGATCAAAAACTCAGGTGACAGCAGATGTTGGCGAGGATATGGAGAAA
GGGGAACACTCCTCCATTGTTGGTGGGATTGCAAGCTTTGTACACCACTC
TGGGAATCAGTCTGGCGGGTCCTCACAAATTGGACATAGTACTACCGGAG
GGATCCCGCAAAACTCTCATGGGGCTATATCCCGAAAAAGTCCCACCCGG
TAAAAAAAAAACTGTTCCCCTAGGTTCTATAAGCCTTGGTTATATTAACC
AGAACCT

Query= MSMg01no336_p16.b1 MSMg01no336_p16.b1 CHROMAT_FILE:
MSMg01no336_p16.b1 PHD_FILE: MSMg01no336_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:12 2005
         (587 letters)



>mm_chr2_141017730_141018716
          Length = 987

 Score = 1083 bits (560), Expect = 0.0
 Identities = 578/584 (98%), Gaps = 2/584 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccctcatgtacgcagctcagtcaaggtacttcagtgttcagcaaggcatctttca 64
           ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccctcatgaa-gcagctcagtcaaggtacttcagtgttcagcaaggcatctttca 263

                                                                       
Query: 65  tgaagaatgccatcctaaaacactaacaacacttagcatctatagtaagaaacctgtaat 124
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 264 tgaagaatgccatcctaaaacactaacaacacttagcatctatagtaagaaacctggaat 323

                                                                       
Query: 125 ccctgaaggccagagatatctcaccagttccaactgcaattagagcagtgggctagtcca 184
           ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccccgaaggccagagttatctcaccagttccaactgcaattagagcagtgggctagtcca 383

                                                                       
Query: 185 ccgacctattacatgaacaagtctcacatctgtgagaagtttgcatattttggacttgga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccgacctattacatgaacaagtctcacatctgtgagaagtttgcatattttggacttgga 443

                                                                       
Query: 245 tatggatattttctttggatatattcccaaatctttctgacaaaagccagttataaggcc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tatggatattttctttggatatattcccaaatctttctgacaaaagccagttataaggcc 503

                                                                       
Query: 305 tgggtttacctcaagttgtccaggaaggtgtgggtaggcctcacaagtttggttcttaca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgggtttacctcaagttgtccaggaaggtgtgggtaggcctcacaagtttggttcttaca 563

                                                                       
Query: 365 ggagtgattatcattattttctatcagataatcatagataagtaagttaatatttagatg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggagtgattatcattattttctatcagataatcatagataagtaagttaatatttagatg 623

                                                                       
Query: 425 tgtgttacaattatgtttggccagttataatgctgcaaatgcatactggacaggaaatga 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tgtgttacaattatgtttggccagttataatgctgcaaatgcatactggacaggaaatga 683

                                                                       
Query: 485 aaagcaagacatgagaatagacatctcttgaaaactacaaatcttcaggctgggaaacag 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aaagcaagacatgagaatagacatctcttgaaaactacaaatcttcaggctgggaaacag 743

                                                       
Query: 545 aaaaaa-tagaataaaaatgggtctagcttaccacatatattga 587
           |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 744 aaaaaaatagaataaaaatgggtctagcttaccacatatattga 787


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space:   563729
Effective search space used:   563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)