TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CAGCTTTTGTCAAGACAGGAAACAATGCACGAGACACTGCTATCTCCCCA
ACTGCATCTATTTGTCTCCAATGATGGACATTTCTTTGTATTACTGCATG
ATAGGAGCCTAAACCCTCCCAATGCTACTTCGTGTAGCTCAGACTGATCT
CCTACCTCAACATCCAGAAAGCTATGATTTTAAGTCTTGCCACCATGCTG
ATGACATCTGTCTTTTAAACTGGACTCTTTCACTAATTAAATGGCAACAT
GGACTTTTAAAGTCAGGCAAGCAAGAAAAGAGGCATCAAGACCTTGCATA
GGGGCAAACATTTAAAGTCATTTTGTAAATGTTAGGTATTTGATGGAAAA
ACTAAGAAGCTATATAATAATCACATACTAGAGTCACTGTTATAACTTCC
ATGTATGAGGTGAGCCCCCCCCCCAAAAAAAAAAAAACACAGGCAAAGTG
ATCAAGGCCATTACCACTGAAGCTTTCTTTCTCGGAAGTTCCTAGTAAGA
GTTTGATTCAACACAACTGTCCAGTGTAACAGGTCCATCTGGCCCATCTC
TGTAAATGTCGATGAACACCTGCACCCTGGACAAACACATCCTTAGAGTC
CTGCCCACACAAACTATAGCTTCCTTACACAATAACAGGATCCTGGGTGT
TGCTGTTTTATTCTCCTCTCCATGGTAACTGTGTC

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTGGTGACTCTTGAGAGGGCACCTGCTCCTGTTCCTC
CTGCTGCTGCTTCCCCAGCTATTGCTGTGGTTTGTCAAGTGGTCGTGAAC
AAAGAGACTAGAAGAAGAAACTGGATATCCTGACGATGAAGATCAACATC
ACTCCCAGGAACTTGCCCCTGATCAGCATGAAGTAGTCTAAAGGGCTCTA
CACCCTCTTTCCCCTCTAACCTCCTCTCTCTCCTACCTAGTGTTGGAGGG
TTGGAAGGGATTGGGGTGGAGAAGGGTGGTAGATATAAGAACCCAATAAA
TTAGCCAAAAAGAATGGTCATTAAGGGTGACACTGTTCCATCTCTGAATA
TTTGTGCATTTTCTATAGTTCCTTTTAGTATTGATCTCTAGTTTTATTCC
ACTATGATCTGTTAAAATACTAATGTTATTTTGTATGTGTTAAGACATGC
TTTATGGACTCAGTTAAGGAACAGGGTCCATGCTTTTCTTGGTACCGCAC
CTTGCTGTCAACTATATTGTATCTCGCATATTTGTGTTTATACCCAAAGC
TTTTTCCCCCCCGGGTTGGTGGAACTTTTTCTATCCCCCTTAGTTGTAGT
TTTATCTGCCCTTTCTCCTCTGTATATGATCTCTGGAATTCATTTGTATG
TATGTCTCTCCTTTGTCTTCCTCAACTTTATTTTTCAAAGCCTTTGCTTT
TTCTCTG

Query= MSMg01no338_d06.b1 MSMg01no338_d06.b1 CHROMAT_FILE:
MSMg01no338_d06.b1 PHD_FILE: MSMg01no338_d06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:47 2005
         (651 letters)



>mm_chr2_52844768_52845825
          Length = 1058

 Score = 1230 bits (636), Expect = 0.0
 Identities = 647/654 (98%), Gaps = 7/654 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagcttttgtcaagacaggaaacaatgcacgagacactgctatctccccaactgc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 gaattcagcttttgtcaagacaggaaacaatgcacgagacactgctatctccccaactgc 799

                                                                       
Query: 65  atctatttgtctccaatgatggacatttctttgtattactgcatgataggagcctaaacc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 atctatttgtctccaatgatggacatttctttgtattactgcatgataggagcctaaacc 739

                                                                       
Query: 125 ctcccaatgctacttcgtgtagctcagactgatctcctacctcaacatccagaaagctat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 ctcccaatgctacttcgtgtagctcagactgatctcctacctcaacatccagaaagctat 679

                                                                       
Query: 185 gattttaagtcttgccaccatgctgatgacatctgtcttttaaactggactctttcacta 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 gattttaagtcttgccaccatgctgatgacatctgtcttttaaactggactctttcacta 619

                                                                       
Query: 245 attaaatggcaacatggacttttaaagtcaggcaagcaagaaaagaggcatcaagacctt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 attaaatggcaacatggacttttaaagtcaggcaagcaagaaaagaggcatcaagacctt 559

                                                                       
Query: 305 gcataggggcaaacatttaaagtcattttgtaaatgttaggtatttgatggaaaaactaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 gcataggggcaaacatttaaagtcattttgtaaatgttaggtatttgatggaaaaactaa 499

                                                                       
Query: 365 gaagctatataataatcacatactagagtcactgttataacttccatgtatgaggtgagc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gaagctatataataatcacatactagagtcactgttataacttccatgtatgaggtgagc 439

                                                                       
Query: 425 ccc-----ccccccaaaaaaaaaaaaa--cacaggcaaagtgatcaaggccattaccact 477
           |||     |||||||||||||||||||  |||||||||||||||||||||||||||||||
Sbjct: 438 ccctccccccccccaaaaaaaaaaaaaaccacaggcaaagtgatcaaggccattaccact 379

                                                                       
Query: 478 gaagctttctttctcggaagttcctagtaagagtttgattcaacacaactgtccagtgta 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gaagctttctttctcggaagttcctagtaagagtttgattcaacacaactgtccagtgta 319

                                                                       
Query: 538 acaggtccatctggcccatctctgtaaatgtcgatgaacacctgcaccctggacaaacac 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 acaggtccatctggcccatctctgtaaatgtcgatgaacacctgcaccctggacaaacac 259

                                                                 
Query: 598 atccttagagtcctgcccacacaaactatagcttccttacacaataacaggatc 651
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 atccttagagtcctgcccacacaaactatagcttccttacacaataacaggatc 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1058
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1048
Effective search space:   671768
Effective search space used:   671768
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)