CTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTATTTTTCCTAAATTGTAATTGAACTTTTGGCTGGGTATGGTAG
GATGTTCTGCTATCTATGGTCTGTAAAGTCTATATGCTTCTGTCGAGACT
CTTTCTGGCTTTCAAAGTCTGCATTGAGAAGTCAGGTATTATTTTTAATT
GTTTACATTATGTTAATATTTTTATATGTTTATCCTAGAATAGGCTATAT
GTTTATGTTTCCTCAGTTTTTCGCTTGCAGCTTTTAATATTTATTCTTTC
TTTATTTTATAAATTTAGTGTTTTGATTATGATATGTAGAGTTAAACATC
TTTTGTAGTCCAGTTTATTTAATGCTCTGGATGCTTCTTGTAATATAATA
CATATCATCTTCTTTAGGTTAGAAAACTTTTATTTTATGATCCTTTTGAA
AATTTTTTTTGCACCTGTCAGTTGGATTTCTTCTTCTTCTATTCCTACCA
TCCTCTGATCTTTCATAGAATCTGAGGTTTTCTTGATGCTTTATGGTTTC
ATTTGTCTTAGATTTAACATTTCTTTGTTCAAGATATCCATTTTTTCTCT
TGTGTCTTTAATGTCTGAAATTCTCTCTACCATCTCCTGTACATTCTGTT
TGTAAGGATTACCTTGACCTTCCTGTTTGAGTTCCTAAGTTTTTCATTTG
CAGATTATTCTCATCTTGGGNTTTCTTGGTTGATN

NCGATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCTCTTTTAGTCGGGCGGAGGTGGCA
CATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGTAGGCGGATTTCTGAG
TTTGAGGCCAGCCTGGTCTACAGAGTGAGTTCTGGGACAGCCAGGGCTAA
AATGAGAAACACTGTCTCAAAAAACAAACAAAAACAAAAACAAAAACAAA
AACAAAAAAACAAAACAAAAAGAATCCTCTCTTTTCTATTTGTTCGCTTG
AGAGTTGGGCATATACTATCTCTGATCCATTTTGTTAAAGCTTTCTCTGA
CTTTTGTCTGCCCTCTATTAGACCTCATTGTCTGGGATTTAAGGTATGTG
CTAAAAGTGTGTCTCTATTCCAGCCAGAGTAATTAATAATATACGTTCTA
GCCAGAGCAGCCATTTTGCTGGTTTAAAATCTATTTATACCACCGACCAA
ACTTGATTTCTTTAATTGTCCAGTGCCTCTGCCATTTCCTGTCCTGAGGA
AGCTTTGCCTCTGTAATGTGCTTTTTCACACTTCCATTCTTCAGTGTGGA
TTTTAAATTATGAATTCTCAAAATAAACATAGGATGCTAAATCTCTTTTT
TATCTTCAGAAGGAGCAGTATGAATTTTTATTTTTATAAACATGATTTTA
ACACATTTTTTACATAGAATTTGTTCTCCTAAGAGGCA

Query= MSMg01no340_a20.g1 MSMg01no340_a20.g1 CHROMAT_FILE:
MSMg01no340_a20.g1 PHD_FILE: MSMg01no340_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:29:01 2005
         (637 letters)



>mm_chr2_55772483_55773513
          Length = 1031

 Score =  632 bits (327), Expect = 0.0
 Identities = 397/423 (93%), Gaps = 8/423 (1%)
 Strand = Plus / Minus

                                                                        
Query: 215  tttgttcgc-ttgagagttgggcatatactatctctgatccattttgttaaagctttctc 273
            ||||||| | || ||||||||||||| ||| |||||||| ||||||||||||||||||||
Sbjct: 1031 tttgttcacatt-agagttgggcatacactttctctgattcattttgttaaagctttctc 973

                                                                        
Query: 274  tgacttttgtctgccctctattagacctcattgtctgggatttaaggtatgtgctaaaag 333
            ||||||||||||||||| ||||||||||||||||| || |||||||||||||||||| ||
Sbjct: 972  tgacttttgtctgccctgtattagacctcattgtcaggaatttaaggtatgtgctaagag 913

                                                                        
Query: 334  tgtgtctctattccagccagagtaattaataatatacgttctagccagagcagccatttt 393
            |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 912  tgtgtctctattccagccagaggaactaataatatacgttctagccagagcagccatttt 853

                                                                        
Query: 394  gctggtttaaaatctatttataccaccgaccaaacttgatttctttaattgtccagtgcc 453
            ||||| ||||||||| | |||||||| ||||||||||||||||||||| ||||||| |||
Sbjct: 852  gctggattaaaatctgtctataccacagaccaaacttgatttctttaactgtccagcgcc 793

                                                                        
Query: 454  tctgccatttcctgtcctgaggaagctttgcctctgtaatgtgctttttcacacttccat 513
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 792  tctgccatttcctgtcctgaggaagctttgcctctgtaatgtactttttcacacttccat 733

                                                                        
Query: 514  tcttcagtgtggattttaaattatgaattctcaaaataaacataggatgctaaatctctt 573
            ||||||||||||||||||||||||||||||||     ||||||||||||| |||||||||
Sbjct: 732  tcttcagtgtggattttaaattatgaattctc-----aaacataggatgcaaaatctctt 678

                                                                        
Query: 574  ttttatcttcagaaggagcagtatgaatttttatttttataaacatgattttaacacatt 633
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677  tttt-tcttcagaaggagcagtatgaatttttatttttataaacatgattttaacacatt 619

               
Query: 634  ttt 636
            |||
Sbjct: 618  ttt 616


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1031
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1021
Effective search space:   640167
Effective search space used:   640167
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)