XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTT
TGTTTACTTCTGAGCCCCAATTTTTAATGGGGTTATTCGATTTTCTGAAG
TCCACCTTCTTGAGTTCTTTATATATGTTGGATATTAGTCCCCTATCTGA
TTTAGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCT
TATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCC
CATTTGTCAATTCTCGATCTTACAGCACAAGCCATTGCTGTTCTGTTCAG
GAATTTTTCCCCTGTGCCCATATCTTCAAGGCTTTTCCTCACTTTCTCCT
CTATAAGTTTCAGTGTCTCTGGTTTTATGTGAAATTCCTTGATCCACTTA
GATTTGACCTTAGTACAAGGAGATAAGTATGGATCAATTCGCATTCTTCT
ACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGAAAATGCTGTCTT
TCTTCCACTGGATGGTTTTAGCTCCCTTGTCGAACATTCAGTGATCATAT
ATGTGTGCGTTTCATTTTTGGGCCTTCTCTTTTATTCCCTTTGTCCCCCT
TGTTTTGTTTTTTTCCCCCTTACTTTGCCTTTTTTTTCCCCTTTGTTCTC
GTTTTTCCCCCCTCTTTGTTTACCTTGGTGGTTTCCCCTCTTCCGTTTTC
CCCCTTTTCCTTTTATACATTTTTTCCCCCCCATTTTTTCCCTCCTTTTT
TTTTTTCCCCATTTCTCCCTCCCCCTTTCTTTTCCTTTTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCTTCCTTTGTCCCTCCAGATGTATTCTCCTCCC
TTTCCTTCTCTCATGGTTTTGCCCCAGAACATTAACCTGCCTACATTATG
TACACTAGCTCCTAGTTCCTGTCAGGTATGACTGATGAGAAGACAGGAGA
ATGTATTTGTTCCTTTTTATGTTCTTGAGAAATGACTGAGTCTGTGAAAG
ACTCATTGTTTTTCTCAAGGTAGTCTGATTTTCACAAGTTTGTTATTGGG
AGCTTTTAAGGCAATTTTTCTTGTACTATACTCTCTCTAAATTGGGGAGC
AGTTCAGTTCCTACAGTACCCATCAGTGTTCCCCTGCTTCTTGCCACATC
TTTCCAAATACATAACCCTAGAATATCTCTCTCTCTCTCTCCCTCTCTCT
GGAATATCATAGAACCTCACTGACTCTTGATAACGTGTAGCTGGGCATGT
TCATATCAGAATAGTTTTCTCACATGGTACAGACAGTGGTTTTTAACATA
TGGCTTAGGAACTTTTAAATGATACTTTGTTGTTTGAGAAATTGAAATTA
ATTTTGATTATATTTACCCCACTTCTTCCTTCCGCCTCCAAATCCTTTTT
TTTAATTCCTTGGCCCGGGCCTAAATTTTGAGTTTTTATCTCCATCTTTC
AAGGAATAAAAGTTCTCCCCCCCTTACCTAAATTTTTTAAAAAAAACTTT
TACATAGGTACCCCCTTCTCCTCTTCTCTTTTCGGAATATCCC

Query= MSMg01no341_j19.g1 MSMg01no341_j19.g1 CHROMAT_FILE:
MSMg01no341_j19.g1 PHD_FILE: MSMg01no341_j19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:55 2005
         (456 letters)



>mm_chr2_94845970_94846825
          Length = 856

 Score =  808 bits (418), Expect = 0.0
 Identities = 444/456 (97%), Gaps = 6/456 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttcctttgtccctccagatgtattctcctccctttccttctctcatggttttgccccag 60
           ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 cttcctttgtccctccaaatgtattctcctccctttccttctctcatagttttgccccag 260

                                                                       
Query: 61  aacattaacctgcctacattatgtacactagctcctagttcctgtcaggtatgactgatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacattaacctgcctacattatgtacactagctcctagttcctgtcaggtatgactgatg 320

                                                                       
Query: 121 agaagacaggagaatgtatttgttcctttttatgttcttgagaaatgactgagtctgtga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaagacaggagaatgtatttgttcctttttatgttcttgagaaatgactgagtctgtga 380

                                                                       
Query: 181 aagactcattgtttttctcaaggtagtctgattttcacaagtttgttattgggagctttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagactcattgtttttctcaaggtagtctgattttcacaagtttgttattgggagctttt 440

                                                                       
Query: 241 aaggcaatttttcttgtactatactctctctaaattggggagcagttcagttcctacagt 300
           ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||| |
Sbjct: 441 aaggcaatttttcttgtactatactctctctaaattgtggagcatttcagttcctacaat 500

                                                                       
Query: 301 acccatcagtgttcccctgcttcttgccacatctttccaaatacataaccctagaatatc 360
           |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||   
Sbjct: 501 acccatcagtgttcccctgcttcttgccacatcttttcaaatacataaccctagaat--- 557

                                                                       
Query: 361 tctctctctctctccctctctctggaatatcatagaacctcactgactcttgataacgtg 420
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ---ctctctctctccctctctctggaatatcatagaacctcactgactcttgataacgtg 614

                                               
Query: 421 tagctgggcatgttcatatcagaatagttttctcac 456
           ||||||||||||||||||||||||||||||||||||
Sbjct: 615 tagctgggcatgttcatatcagaatagttttctcac 650


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space:   377316
Effective search space used:   377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)