Query= MSMg01no343_g17.b1 MSMg01no343_g17.b1 CHROMAT_FILE:
MSMg01no343_g17.b1 PHD_FILE: MSMg01no343_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:15 2005
(362 letters)
>mm_chr2_163890356_163891117
Length = 762
Score = 683 bits (353), Expect = 0.0
Identities = 356/357 (99%)
Strand = Plus / Minus
Query: 5 gaattccctacctattctagagatgctgtctttttaccagaagtaattctgatatgctga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaattccctacctattctagagatgctgtctttttaccagaagtaattctgatatgctga 502
Query: 65 ctgctccaggtgactgactgaatcactgcattgttggggaaacctgttggcctaacatgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctgctccaggtgactgactgaatcactgcattgttggggaaacctgttggcctaacatgt 442
Query: 125 ttttaacctcccgtagcgcgctggccttggttcccttcagcatcaagcccttgctgcgca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttaacctcccgtagcgcgctggccttggttcccttcagcatcaagcccttgctgcgca 382
Query: 185 gagcatctgcatatgaagccctggagaagtacgccctggcctacgttgactataagactg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagcatctgcatatgaagccctggagaagtacgccctggcctacgttgactataagactg 322
Query: 245 tgctacagatcgataacagtgtggcatccgccctggaaggcatcaacaggtaagcctagt 304
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgctgcagatcgataacagtgtggcatccgccctggaaggcatcaacaggtaagcctagt 262
Query: 305 gtgcgcagaacttcctcatggagtcaggactgatttggtttggttattttgggggag 361
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgcgcagaacttcctcatggagtcaggactgatttggtttggttattttgggggag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 762
Length adjustment: 9
Effective length of query: 353
Effective length of database: 753
Effective search space: 265809
Effective search space used: 265809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_g17.g1 MSMg01no343_g17.g1 CHROMAT_FILE:
MSMg01no343_g17.g1 PHD_FILE: MSMg01no343_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:15 2005
(333 letters)
>mm_chr2_163703123_163703855
Length = 733
Score = 495 bits (256), Expect = e-144
Identities = 306/334 (91%), Gaps = 22/334 (6%)
Strand = Plus / Plus
Query: 1 caactgggagtcagaactcctgagttccagataggagtggctctgcggccaaggcaagct 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 caactgggagtcagaactcctgagttccagataggagtggctctgtggccaaggcaagct 260
Query: 61 ccggaaaccctgggtacctgccttctcagtatggagttattttgaatctaagattcttag 120
||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 261 ccggaaaccctgggtacctgcgttctcagtatggagttattttgaatcta---------g 311
Query: 121 tcaggatcggctaaggatggctatgaggggaatctgaaaagagtaggtttgtgtgactgt 180
|||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||
Sbjct: 312 tcaggatcggctaaggatgggtatgaggggaatctgagaagagtaggtttgtgtgactgt 371
Query: 181 gagactctgtgtgtgtgtctgtgtgtctgtgtatctgtctgtccatcagaggaggcaaac 240
|||||||||||||||||| |||||| |||| ||||||||||||||||||||
Sbjct: 372 gagactctgtgtgtgtgt--gtgtgt--gtgt--------gtccatcagaggaggcaaac 419
Query: 241 -ccccagacttcctaaggctcccatgtgtgtgaaaggcccctagctgagatgggttcctc 299
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 420 accccagacttcctaaggctcccatgtgtgtgaaaggcccctagcttagctgggttcctc 479
Query: 300 cagaaggctggaaagctgacttcctcccagacac 333
||||||||||||||||||||||||||||||||||
Sbjct: 480 cagaaggctggaaagctgacttcctcccagacac 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
