Query= MSMg01no347_b01.b1 MSMg01no347_b01.b1 CHROMAT_FILE:
MSMg01no347_b01.b1 PHD_FILE: MSMg01no347_b01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:55 2005
(418 letters)
>mm_chr2_157238075_157238890
Length = 816
Score = 706 bits (365), Expect = 0.0
Identities = 402/417 (96%), Gaps = 8/417 (1%)
Strand = Plus / Minus
Query: 5 gaattctctg--tttcctagtccagtttctcttgaggttagagaagagactaatggtgtt 62
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 gaattctctggattt--tagtccagtttctcttgaggttagagaagagactaatggtgtt 574
Query: 63 taggtggtcccagaagagaagaaaaacaggtaagcaagaaaagatacggggaggatagat 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 taggtggtcccagaagagaagaaaaacaggtaagcaagaaaagatacggggaggatagat 514
Query: 123 ggtgaaagaaggtgagacttcgagaagaatcagccctcacttcatcataagagcattggt 182
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 ggtga---aaggtgagacttcgagaagaatcagccctcacttcatcataagagcattggt 457
Query: 183 gagtcaaagtagagaaaaggagacagcttattttacgactaggcgtggctaggtgtcagc 242
||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 456 gagtcaaagtagagaaaaggagacagcttgttttacgactaggcgcggctaggtgtcagc 397
Query: 243 ttagaatggcaatcacagtgactgagtgcatagaacaggtcatagaccctgacacatgac 302
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 396 ttagaatggcaatcacagtgactgagtgcagagaacaggtcatagaccctgacacatgac 337
Query: 303 cctttctctcttgtctcctattgcagaacggagcaatctatagtcctcgaggtcctgact 362
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 336 cctttctctcttgtctcctattgcagaacggagcaatctagagtcctcgaggtcctgact 277
Query: 363 ctccctccatagcttataattgtctctttttt-gccaacatagtcttttgtgcgtgg 418
||||||||||||||||||||||||| |||||| ||||||| ||||||||||| ||||
Sbjct: 276 ctccctccatagcttataattgtctttttttttgccaacagagtcttttgtgtgtgg 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 816
Length adjustment: 9
Effective length of query: 409
Effective length of database: 807
Effective search space: 330063
Effective search space used: 330063
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_b01.g1 MSMg01no347_b01.g1 CHROMAT_FILE:
MSMg01no347_b01.g1 PHD_FILE: MSMg01no347_b01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:55 2005
(542 letters)
>mm_chr2_157049438_157050379
Length = 942
Score = 1002 bits (518), Expect = 0.0
Identities = 540/550 (98%), Gaps = 8/550 (1%)
Strand = Plus / Plus
Query: 1 tcacttggcaaggaggaacactccctgaagatggccttctcccttcagaagggtccatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcacttggcaaggaggaacactccctgaagatggccttctcccttcagaagggtccatcc 260
Query: 61 gccactcttttccatgatgctgaactcctgccagcacagggttctgaggaggagagtctt 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccgctcttttccatgatgctgaactcctgccagcacagggttctgaggaggagagtctt 320
Query: 121 tgtagcttgtatggcgaagctaaggtgagcaaacacaagcataggtagagagaatagccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtagcttgtatggcgaagctaaggtgagcaaacacaagcataggtagagagaatagccc 380
Query: 181 tgcagctcaatggaatgagccaatggcttgactggaatccagtcctttctagaggtctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgcagctcaatggaatgagccaatggcttgactggaatccagtcctttctagaggtctta 440
Query: 241 aagatgcttcatgttctaataactggaaaggccctctacataaattctcagcctaacgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagatgcttcatgttctaataactggaaaggccctctacataaattctcagcctaacgaa 500
Query: 301 acctaacctcattttgtttctcaaggagatctataatttaggaactggtttgggatacta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acctaacctcattttgtttctcaaggagatctataatttaggaactggtttgggatacta 560
Query: 361 aatgaatacccattgcatt-----aaaaaaa-a-att-attatttttattttatgtgtga 412
||||||||||||||||||| ||||||| | ||| ||||||||||||||||||||||
Sbjct: 561 aatgaatacccattgcatttttttaaaaaaagatatttattatttttattttatgtgtga 620
Query: 413 gttgccctgcatttctatgcatcatatacatgcagtacccatgtaggccagaagacggtg 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gttgccctgcatttctatgcatcatatacatgcagtacccatgtaggccagaagacggtg 680
Query: 473 ttggatctcctagagctggagttatagacagttgtgagctgtcatgtaggtgctagaaac 532
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttggatctcctagaactggagttatagacagttgtgagctgtcatgtaggtgctagaaac 740
Query: 533 tgaccctggg 542
||||||||||
Sbjct: 741 tgaccctggg 750
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 542
Length of database: 942
Length adjustment: 10
Effective length of query: 532
Effective length of database: 932
Effective search space: 495824
Effective search space used: 495824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
