Query= MSMg01no348_i20.b1 MSMg01no348_i20.b1 CHROMAT_FILE:
MSMg01no348_i20.b1 PHD_FILE: MSMg01no348_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:53 2005
(517 letters)
>mm_chr2_78568085_78569002
Length = 918
Score = 880 bits (455), Expect = 0.0
Identities = 502/523 (95%), Gaps = 11/523 (2%)
Strand = Plus / Plus
Query: 5 gaattctttgtctgcaggtgtgaccctttgaaatctgccctttccatgttagctgtgctg 64
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 197 gaattctttgtctgcaggtgtgaccctttgaaatctgcccttcccatgttagctgtgctg 256
Query: 65 tcattgtttatggctcctttaggcagccatattgttgaagtgtgataggacaggaaaact 124
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 257 tcattgtttatggctcctttaggcagccatattgttgaagtgtcataggacaggaaaact 316
Query: 125 actactcccatttt-tttcatttatttttttattctaaagaaatatcaaaaggcagaggc 183
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct: 317 actactcccattttattt-atttatttttttattctaaagaaatatcaaaaggcaaaggc 375
Query: 184 ctcagttcatgcagtgaagccatggtgtttgtgaaatgcaatactggtttgtgccagact 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ctcagttcatgcagtgaagccatggtgtttgtgaaatgcaatactggtttgtgccagact 435
Query: 244 tagttctgtgtttctcactagattaaaaaaaaaaaat---------cagagggtaagaca 294
|||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 436 tagttctgtgtttctcactagattaaaaaaaaaaaaaacaaaaaaacagagggtaagaca 495
Query: 295 tctgataaaactagaacttgggataactattccttattattttctcagaaatgctaattt 354
||||||||| |||| || | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tctgataaagctaggacctaggataactattccttattattttctcagaaatgctaattt 555
Query: 355 ttagataaatgatttcagagcattggaggaactacaggaactgccttaaataatttgaag 414
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ttagataaatgattccagagcattggaggaactacaggaactgccttaaataatttgaag 615
Query: 415 ataattgtatagctttaatggccaagctagatatagggcaaatatatgaaaacctggact 474
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 616 ataattgtatagctttaatggccaagctagatatagggcaaatatatgaaaacctggaat 675
Query: 475 agactaattttttaagaatagcatactaaagtcatgatactca 517
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 agactaattttttaagaatagcatactaaagtcatgatactca 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 918
Length adjustment: 10
Effective length of query: 507
Effective length of database: 908
Effective search space: 460356
Effective search space used: 460356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_i20.g1 MSMg01no348_i20.g1 CHROMAT_FILE:
MSMg01no348_i20.g1 PHD_FILE: MSMg01no348_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:53 2005
(408 letters)
>mm_chr2_78744190_78744996
Length = 807
Score = 772 bits (399), Expect = 0.0
Identities = 405/407 (99%), Gaps = 2/407 (0%)
Strand = Plus / Minus
Query: 2 attcagctatttagaagaaaaaaaaaatgaagttttcaagttaagttgaggggggctgaa 61
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 attcagctatttagaag-aaaaaaaaatgaagttttcaagttaagttgaggggggctgaa 749
Query: 62 aattaaacactggtgaggtaacccagacccagaaaacaaatgccaaatattctcacttgt 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 aattaaacactggtgaggtaacccagacccagaaaacaaatgccaaatattctcacttgt 689
Query: 122 gggtccatctccaaatccttaaactggagtatatatataacctgacatatccgaagacac 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gggtccatctccaaatccttaaactggagtatatatataacctgacatatccgaagacac 629
Query: 182 cagaacagaagaaacggtccacggtgagggggtacttagtgcagaaggagctctagaaat 241
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 628 cagaacagaagaaacggtccacggtga-ggggtacttagtgcagaaggagctctagaaat 570
Query: 242 gaggatagaggacagaagacacaaaagggcaatggacaaaatgtagggaagatttcaaac 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gaggatagaggacagaagacacaaaagggcaatggacaaaatgtagggaagatttcaaac 510
Query: 302 tgaagaggggtaggaaggggagtacagggagagaagaaggaaggagaaataagcaacact 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 tgaagaggggtaggaaggggagtacagggagagaagaaggaaggagaaataagcaacact 450
Query: 362 gggaatatttgaaaaagccagaaaaaacagtttgcaaacttgtttta 408
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gggaatatttgaaaaagccagaaaaaacagtttgcaaacttgtttta 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 807
Length adjustment: 9
Effective length of query: 399
Effective length of database: 798
Effective search space: 318402
Effective search space used: 318402
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
