Query= MSMg01no348_k18.b1 MSMg01no348_k18.b1 CHROMAT_FILE:
MSMg01no348_k18.b1 PHD_FILE: MSMg01no348_k18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:03 2005
(608 letters)
>mm_chr2_97817199_97818207
Length = 1009
Score = 1048 bits (542), Expect = 0.0
Identities = 590/606 (97%), Gaps = 3/606 (0%)
Strand = Plus / Plus
Query: 5 gaattctattctctcaagcaatctttatgctt-taatctcctaccatcacaatgataatt 63
||||||||||| || ||||||||||||| ||| ||||||||||||| ||||| |||||||
Sbjct: 205 gaattctattcacttaagcaatctttatacttctaatctcctaccaccacaacgataatt 264
Query: 64 tcttgtgtaatgttttatatcatgttattttaacataattagctagtgtcagatggtagg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcttgtgtaatgttttatatcatgttattttaacataattagctagtgtcagatggtagg 324
Query: 124 cataattactataaatggatattttaaaagtcgtgaagaattgaaataaaattgtaacat 183
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 325 cataattactataaatggatattttaaaagtcatgaagaattgaaataaaattgtaacat 384
Query: 184 aaaagtatgtaatttcatattataaacttcattgagtgtaagcattagcataaccacaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaagtatgtaatttcatattataaacttcattgagtgtaagcattagcataaccacaaa 444
Query: 244 ttgatgaatgtagaagtgcacatgtcatacattttttgaactgtattttattaaagtaat 303
|||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 445 ttgatggatgtggaagtgcacatgtcatacattttttgaactgtattttataaaagtaat 504
Query: 304 tttaaatgatcagtttataaaagacttgcacatattccaaggagatctttttagacataa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tttaaatgatcagtttataaaagacttgcacatattccaaggagatctttttagacataa 564
Query: 364 gtgttttagacatatagatatgatacattcttcttgaatgtatttattgaagctttcata 423
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 565 gtgttttagacatatagatatgatacattcttcttaaatgtatttattgaagctttcata 624
Query: 424 aaggtataaataatataacaaatgtgcatttactagtataatttacttactacaggcagt 483
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 625 aagggataaataatataacaaatgtgtatttactagtataatttacttactacaggcagt 684
Query: 484 caccaggtctcactcatctttgtttgg-cccatgcgtgcctactaatttacacaaatact 542
||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 685 caccaggtctctctcatctttgtt-ggtcccatgcgtgcctactaatttacacaaatact 743
Query: 543 ttatataattcagtttcgataccctgaccattagaattatgttttcatctttctactatg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ttatataattcagtttcgataccctgaccattagaattatgttttcatctttctactatg 803
Query: 603 gatctg 608
||||||
Sbjct: 804 gatctg 809
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 608
Length of database: 1009
Length adjustment: 10
Effective length of query: 598
Effective length of database: 999
Effective search space: 597402
Effective search space used: 597402
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_k18.g1 MSMg01no348_k18.g1 CHROMAT_FILE:
MSMg01no348_k18.g1 PHD_FILE: MSMg01no348_k18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:03 2005
(586 letters)
>mm_chr2_97987000_97987985
Length = 986
Score = 1125 bits (582), Expect = 0.0
Identities = 585/586 (99%)
Strand = Plus / Minus
Query: 1 accacattcatttgtttacaaacttatatacatgactgatgttagagaggaaataacaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 786 accacattcatttgtttacaaacttatatacatgactgatgttagagaggaaacaacaca 727
Query: 61 taccactataataaggagatatttagtaaaattctaaatttatagctaaagttatatttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 taccactataataaggagatatttagtaaaattctaaatttatagctaaagttatatttg 667
Query: 121 tgatattgctcatcaatttctttaattttctcatatgttatgatggacaataacagcagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 tgatattgctcatcaatttctttaattttctcatatgttatgatggacaataacagcagc 607
Query: 181 tatccatgtacgtcagtgccaattaaggcatatacatattaactatgaagctaaaatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 tatccatgtacgtcagtgccaattaaggcatatacatattaactatgaagctaaaatatt 547
Query: 241 tcattgcacatataaagaaaactatgtataaaatatttatactcaggtacaaatttgata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tcattgcacatataaagaaaactatgtataaaatatttatactcaggtacaaatttgata 487
Query: 301 tcaacaagtctgtatttgaaacttgttattggaatcaatcatttcatgtcaggacctttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tcaacaagtctgtatttgaaacttgttattggaatcaatcatttcatgtcaggacctttg 427
Query: 361 gatgcaaacctaaatttacaacattctaaccattctgcatatataagagcatgtttagta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 gatgcaaacctaaatttacaacattctaaccattctgcatatataagagcatgtttagta 367
Query: 421 ttttggtctccagactttatgcttgtggttgttactatttttatgtttctgaagtcacat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ttttggtctccagactttatgcttgtggttgttactatttttatgtttctgaagtcacat 307
Query: 481 ggttgccattggagaatcaggtgttttgttaatgtgcatttgctgatgaaatgtgttgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ggttgccattggagaatcaggtgttttgttaatgtgcatttgctgatgaaatgtgttgtg 247
Query: 541 catagcagaatgtctagagaaacattatacagtattgattgactca 586
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 catagcagaatgtctagagaaacattatacagtattgattgactca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
