Query= MSMg01no349_f15.b1 MSMg01no349_f15.b1 CHROMAT_FILE:
MSMg01no349_f15.b1 PHD_FILE: MSMg01no349_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:56 2005
(571 letters)
>mm_chr2_40872639_40873609
Length = 971
Score = 1065 bits (551), Expect = 0.0
Identities = 563/567 (99%)
Strand = Plus / Plus
Query: 5 gaattccagtttttcactgtcacctctttactagtgccctgatccagcaactccatctga 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 205 gaattccagtttttcactgtcacctctttactagtgccctgatccagcaactccatttga 264
Query: 65 ttttgctttctcaatctttactattgtttaatattggcaatgtggctcaagcaaaggaga 124
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 265 ttttgctttctcaatctttactattgtttaattttggcaatgtggctcaagcagaggaga 324
Query: 125 tgtggttgcagagatcctattcattgtgtgatagtgcttaacattttagagctattttct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtggttgcagagatcctattcattgtgtgatagtgcttaacattttagagctattttct 384
Query: 185 caggtcttaaacataagaccctcaatataagctctctctcacatgtggttgtagaattta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caggtcttaaacataagaccctcaatataagctctctctcacatgtggttgtagaattta 444
Query: 245 ttacttttttgttattatatatagataacctagtcaatatttatataactaaataatata 304
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 445 ttacttttttgttattatatatagataacctagtcaatatttatatagctaaataatata 504
Query: 305 taactcagaatgaatgatatttcttttctaattcagtatatcagttggaaaactaagttt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 taactcagaatgaatgatatttcttttctaattcagtatatcagttggaaaactaagttt 564
Query: 365 aacttcatgtaatcttattggtagttttagatgtgttggaggatgttcaactttctgata 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aacttcatgtaatcttattggtagttttagatgtgttggaggatgttcaactttctgata 624
Query: 425 ctgtgatgagatattgtcatctacaaagaaatatatagggctgtatttatactagggtgt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ctgtgatgagatattgtcatctacaaagaaatatatagggctgtatttatactagggtgt 684
Query: 485 ttgtggcccaacaccagtgcttggtcgtattttctttagaatgtcaggaataagagcgtg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttgtggcccaacaccagtgcttggtcgtattttctttagaatgtcaggaataagagcgtg 744
Query: 545 ttcttagattccaaatcctctcccatt 571
|||||||||||||||||||||||||||
Sbjct: 745 ttcttagattccaaatcctctcccatt 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_f15.g1 MSMg01no349_f15.g1 CHROMAT_FILE:
MSMg01no349_f15.g1 PHD_FILE: MSMg01no349_f15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:56 2005
(511 letters)
>mm_chr2_40939765_40940675
Length = 911
Score = 924 bits (478), Expect = 0.0
Identities = 502/510 (98%), Gaps = 1/510 (0%)
Strand = Plus / Minus
Query: 1 tatctgtacaaaactttatatccattctaaaaaacaataaatttcattcctaaaagtcta 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 669 tatctgtacaaaactttatatccattctaaaaaacaatgaatttcattcctaaaagtcta 610
Query: 61 tctttattagtaacaacagtaaattctatggattctggtaatttggccatacctcaagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tctttattagtaacaacagtaaattctatggattctggtaatttggccatacctcaagat 550
Query: 121 gaattgtgctttctacattttttaacaatatattctcatttatctctatcaacagaatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gaattgtgctttctacattttttaacaatatattctcatttatctctatcaacagaatta 490
Query: 181 gtgtattttaactaattcaattgtttcatctttggtttcaattctttagaatttcttttc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gtgtattttaactaattcaattgtttcatctttggtttcaattctttagaatttctttta 430
Query: 241 tatataactactcataatgaattttaagtatttttcttaatttgtatgtgttatggaatg 300
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 429 tatataactactcataatgaattttaagtattttccttaatttgtatgtgttatggaatg 370
Query: 301 atgtaaacttatataattacataaataaaattcatggactattttgtcctatactttact 360
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 369 atgtaaacttatataattacataaataaaatccatggactattttgtcctatactttact 310
Query: 361 gcatttgtttctgttagttgaaaattcatacaatatattctcatatgatgctccactctc 420
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gcatttgtttctattagttgaaaattcatacaatatattctcatatgatgctccactctc 250
Query: 421 attccttcccagatcctacctaccctcccacaatccaactcatgcctttttccttccttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 attccttcccagatcctacctaccctcccacaatccaactcatgcctttttccttccttc 190
Query: 481 cttccttccttccttccttcctttccttcc 510
|||| ||||||||||| |||||| ||||||
Sbjct: 189 cttctttccttccttctttcctt-ccttcc 161
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
