Query= MSMg01no350_i23.b1 MSMg01no350_i23.b1 CHROMAT_FILE:
MSMg01no350_i23.b1 PHD_FILE: MSMg01no350_i23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:31 2005
(413 letters)
>mm_chr2_137734971_137735785
Length = 815
Score = 702 bits (363), Expect = 0.0
Identities = 402/415 (96%), Gaps = 2/415 (0%)
Strand = Plus / Plus
Query: 1 gcaatgataactaccaaggagaacacattcctcaaagacctttagctggtgattccttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcaatgataactaccaaggagaacacattcctcaaagacctttagctggtgattccttgg 260
Query: 61 ggaacagttaggagaactacatccccaaattgggctgatatttctgagacatcatctgct 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaacagttaggagaaccacatccccaaattgggctgatatttctgagacatcatctgct 320
Query: 121 tattttggatatggaataaaatagagaatgaagaaatggtttaaggaagaaaaaagtgat 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 tattttggatatggaataaaatagagagtgaagaaatggtttaaggaagaaaaaagtgat 380
Query: 181 gaaaatttggggagagagaaaaatgttcaaggggaggagagaatagaatcccctaaccaa 240
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 381 gaaaatttggggagagagaaaaatgttcaaagggaggagagaatagaatcccctaaccaa 440
Query: 241 taaccagcatgttttagattcatttgttttcttccttttacttcccagacagcaaattc- 299
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaccagcatgttaaagattcatttgttttcttccttttacttcccagacagcaaattcc 500
Query: 300 attctgtacaactgataacttgaaagagtgaccctggcagctgagaaaaattgggggtgc 359
||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct: 501 attctgtacaattgataacttgaaagagtgaccctgccagctgagaaaaattgggggtac 560
Query: 360 aagtatggggataaaaa-ctttgtacattctttcacacaaccaaaacttgtacct 413
|||| |||||| ||||| ||||||||||||||||||||||||| |||||||||||
Sbjct: 561 aagtgtggggaaaaaaaactttgtacattctttcacacaaccagaacttgtacct 615
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 815
Length adjustment: 9
Effective length of query: 404
Effective length of database: 806
Effective search space: 325624
Effective search space used: 325624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no350_i23.g1 MSMg01no350_i23.g1 CHROMAT_FILE:
MSMg01no350_i23.g1 PHD_FILE: MSMg01no350_i23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:42:31 2005
(405 letters)
>mm_chr2_137906129_137906933
Length = 805
Score = 667 bits (345), Expect = 0.0
Identities = 345/345 (100%)
Strand = Plus / Minus
Query: 1 tccagtggagacatctgttctggagttttcccttgctgagatgtcttttagtcagttatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 tccagtggagacatctgttctggagttttcccttgctgagatgtcttttagtcagttatt 286
Query: 61 caatagatttactagttgtaggcttgtttagtttcttaaagatccataattcagtactgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 caatagatttactagttgtaggcttgtttagtttcttaaagatccataattcagtactgg 226
Query: 121 tgtgttttatacttctgtgaatttatttgcatggctcttattgttcaaatcatttatatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tgtgttttatacttctgtgaatttatttgcatggctcttattgttcaaatcatttatatc 166
Query: 181 tttaggtggatttatttctaaataatctattctctttgatgctattgttaatgttatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 tttaggtggatttatttctaaataatctattctctttgatgctattgttaatgttatttt 106
Query: 241 attctcctagattatcccacttgtacttaattcctggcaatctcttcttctgcctcctgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 attctcctagattatcccacttgtacttaattcctggcaatctcttcttctgcctcctgt 46
Query: 301 ggttttgttgcatccattgtaatatctcctctcgtttctggtttt 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 45 ggttttgttgcatccattgtaatatctcctctcgtttctggtttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
