Query= MSMg01no352_l12.b1 MSMg01no352_l12.b1 CHROMAT_FILE:
MSMg01no352_l12.b1 PHD_FILE: MSMg01no352_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:22 2005
(424 letters)
>mm_chr2_4108352_4109175
Length = 824
Score = 685 bits (354), Expect = 0.0
Identities = 363/366 (99%)
Strand = Plus / Minus
Query: 59 gatagatggttttctcctgggagtagaaccatcccaacacccatgccaggggactcttgc 118
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 624 gatagatggttttctcctgggagtagaatcatcccgacacccatgccaggggactcttgc 565
Query: 119 aggtcctgctggggccactggctctgtgtcctacggatgggtgaacatgcttctattctc 178
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aggtcctgctgaggccactggctctgtgtcctacggatgggtgaacatgcttctattctc 505
Query: 179 tattttcagtgctcctgggaaacatccagagtctaagaggaagtatgacctctggatatt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tattttcagtgctcctgggaaacatccagagtctaagaggaagtatgacctctggatatt 445
Query: 239 aatagcttccattagcactcgacagaaagaagccagtctttgatatctgaagctggcaaa 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatagcttccattagcactcgacagaaagaagccagtctttgatatctgaagctggcaaa 385
Query: 299 cctccctgcccacatgctgccaaattttccatcttgtgggcacctggtagctagcttctc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cctccctgcccacatgctgccaaattttccatcttgtgggcacctggtagctagcttctc 325
Query: 359 atggatgaagctgtgcgaacacattctttcccctccttccacaggatagcctaccccttg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atggatgaagctgtgcgaacacattctttcccctccttccacaggatagcctaccccttg 265
Query: 419 ttctgt 424
||||||
Sbjct: 264 ttctgt 259
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no352_l12.g1 MSMg01no352_l12.g1 CHROMAT_FILE:
MSMg01no352_l12.g1 PHD_FILE: MSMg01no352_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:22 2005
(314 letters)
>mm_chr2_3929877_3930590
Length = 714
Score = 596 bits (308), Expect = e-175
Identities = 311/312 (99%)
Strand = Plus / Plus
Query: 1 caggacagctaggattacacggagaagccatgtctcaaaacaaatcaaaataaacaaaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggacagctaggattacacggagaagccatgtctcaaaacaaatcaaaataaacaaaca 260
Query: 61 aggaagcaaacaaaaaactaaaactaaaaaacaaacaaaacaccaccaacaaaaaagatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggaagcaaacaaaaaactaaaactaaaaaacaaacaaaacaccaccaacaaaaaagatc 320
Query: 121 ttcatatctctgaagtgaatagttacacatgttttcatgttattttctgttaatttttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttcatatctctgaagtgaatagttacacatgttttcatgttattttctgttaatttttgt 380
Query: 181 gttggcagtgggtgatcttggttattttctacttagggatcaagcatttccagttttcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttggcagtgggtgatcttggttattttctacttagggatcaagcatttccagttttcat 440
Query: 241 gaataaatttgagacattataaatgatcttgttagcttctgtacgtgtgtgtgtgtgtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaataaatttgagacattataaatgatcttgttagcttctgtacgtgtgtgtgtgtgtgt 500
Query: 301 gtgcgtgtgtgt 312
||| ||||||||
Sbjct: 501 gtgtgtgtgtgt 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
