Query= MSMg01no353_a20.b1 MSMg01no353_a20.b1 CHROMAT_FILE:
MSMg01no353_a20.b1 PHD_FILE: MSMg01no353_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:48 2005
(362 letters)
>mm_chr2_78940136_78940897
Length = 762
Score = 654 bits (338), Expect = 0.0
Identities = 353/358 (98%)
Strand = Plus / Plus
Query: 4 ggaattccttggtgtacaaaaaccaactaaatccaagagtcatgcaagttacggccattt 63
|||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 204 ggaatttcttggtgtacaaaaaacaactaaatccaagagtcatgcaagttacggtcattt 263
Query: 64 ggagataaaaaagcctaacccaacagaacacaacacaacaaaacacaacccaacacaacc 123
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggagatagaaaagcctaacccaacagaacacaacacaacaaaacacaacccaacacaacc 323
Query: 124 cagcccacccaagcccaacccaatccagcccaaaacaaccaaacccagcccaaccctccc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 324 cagcccacccaagcccaacccaatccagcccaaaacaaccaaacccagcccaatcctccc 383
Query: 184 agtgtccaggttctcaaatgagaggttagtcgctattagagagctttctaaagagaagtt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agtgtccaggttctcaaatgagaggttagtcgctattagagagctttctaaagagaagtt 443
Query: 244 tacatttgagccagtactgggtctttcaatttgaagacaaagcagtagagaaacctagac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tacatttgagccagtactgggtctttcaatttgaagacaaagcagtagagaaacctagac 503
Query: 304 ttagaatctctctctctctctctctctctctctctctctctctctctctctctctctc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ttagaatctctctctctctctctctctctctctctctctctctctctctctctctctc 561
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 25
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 362
Length of database: 762
Length adjustment: 9
Effective length of query: 353
Effective length of database: 753
Effective search space: 265809
Effective search space used: 265809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no353_a20.g1 MSMg01no353_a20.g1 CHROMAT_FILE:
MSMg01no353_a20.g1 PHD_FILE: MSMg01no353_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:45:48 2005
(464 letters)
>mm_chr2_79086335_79087201
Length = 867
Score = 841 bits (435), Expect = 0.0
Identities = 458/467 (98%), Gaps = 3/467 (0%)
Strand = Plus / Minus
Query: 1 tttaaggctagcaggtatggccaagtcacagagccatga---accttgcaatagacaaaa 57
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct: 667 tttaaggctagcaggtatagccaagtcacagagccatgaaccaccttgcaatagacaaaa 608
Query: 58 caaggcataatgggaattgtgggaatctgaaattataatcttatacaactgtcacttcca 117
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 607 caaggcataatgggaattgtgggaatctgaaatcataatcttatacaactgtcacttcca 548
Query: 118 caagactcatgatatgtttaaatgggtgaagtggaagtatctataaagcccttgaattcc 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 caagactcatgatatgtttaaatgggtgaagtggaagtatctataaagcccttgaattcc 488
Query: 178 actttaaccatcgagttaattaacaatagtcccataagagggtgaaacacacttttatta 237
|||||||||||| |||||| ||||||||||| || |||||||||||||||||||||||||
Sbjct: 487 actttaaccatccagttaagtaacaatagtctcacaagagggtgaaacacacttttatta 428
Query: 238 agtctaatgaaatttaattggctctactgaagtgaatccttatcatggggtccatgctgt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 agtctaatgaaatttaattggctctactgaagtgaatccttatcatggggtccatgctgt 368
Query: 298 tgtgaatgacaatttctgtagctttgagtcccatcaactatttataatctaaaagcctga 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 tgtgaatgacaatttctgtagctttgagtcccatcaactatttataatctaaaagcctga 308
Query: 358 aggtaggggtgagattaaatttttctatctcacagtagactctccttccagactatccac 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aggtaggggtgagattaaatttttctatctcacagtagactctccttccagactatccac 248
Query: 418 agcaccaggcttctattaagaagagaactgtatttagtagaaaattt 464
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 agcaccaggcttctattaagaagagaactgtatttagtagaaaattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 867
Length adjustment: 10
Effective length of query: 454
Effective length of database: 857
Effective search space: 389078
Effective search space used: 389078
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
