Query= MSMg01no354_d14.b1 MSMg01no354_d14.b1 CHROMAT_FILE:
MSMg01no354_d14.b1 PHD_FILE: MSMg01no354_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:19 2005
(602 letters)
>mm_chr2_157930521_157931522
Length = 1002
Score = 1058 bits (547), Expect = 0.0
Identities = 582/594 (97%)
Strand = Plus / Plus
Query: 7 attcagccttctgtctctganagttcataacagagcagcagggcaaggtgagtccttaaa 66
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 207 attcagccttctgtctctgaaagttcataacagagcagcagggcaagatgagtccttaaa 266
Query: 67 tcatgtcaactgtaatagatgccatcaacccaaggggtgccctttaaatcaccactcggg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 267 tcatgtcaactgtaatagatgccatcaacccaaggggtgccctttaaatcaccactcagg 326
Query: 127 gagcactggaccagaagttcagagggcagacacgtgcttctgactgcagtctattgagga 186
||| |||| ||||||||||||||||||||| ||| ||||||||||||| ||||||||||
Sbjct: 327 gagggctgggccagaagttcagagggcagacgcgtccttctgactgcagcctattgagga 386
Query: 187 agtctttgtaacggcctttgatctgggtcttagaaatcaacaacttttgatcactcggag 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 agtctttgtaacggcctttgatctgggtcttagaaatcaacaacttttgatcactcggag 446
Query: 247 gaacagaagaaggtagggtggacttaggcaagacaacagcctggacaaaactcaagtacc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gaacagaagaaggtagggtggacttaggcaagacaacagcctggacaaaactcaagtacc 506
Query: 307 ttcttaattcaagattttcttttttaatcatgtgtgcgtttgtgtgcctagttcgggtct 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ttcttaattcaagattttcttttttaatcatgtgtgcgtttgtgtgcctagttcgggtct 566
Query: 367 gcaggactgcagtgcccatggaggccagaggaccagatgcccctggagccgttgatctgt 426
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 567 gcaggactgcagtgcccatggaggccagaggaccagatgcccctggagccattgatctgt 626
Query: 427 ttggggatatttcacataaaaggagtcatatgatgtgtggtctcatgggagcagctgctt 486
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ttggggatatttcacataaacggagtcatatgatgtgtggtctcatgggagcagctgctt 686
Query: 487 ccaggtagggaaatgctttcaaatcacatttgtactgtgctcacatcacttcctcctttt 546
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 687 ccaggtagggaaatgctttcaaatcacatctgtactgtgctcacatcacttcctcctttt 746
Query: 547 cattgcagagtaatactccgttgtgtagatgccccctgtttgccccctatcagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 cattgcagagtaatactccgttgtgtagatgccccctgtttgccccctatcagt 800
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no354_d14.g1 MSMg01no354_d14.g1 CHROMAT_FILE:
MSMg01no354_d14.g1 PHD_FILE: MSMg01no354_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:19 2005
(369 letters)
>mm_chr2_158119624_158120392
Length = 769
Score = 648 bits (335), Expect = 0.0
Identities = 363/383 (94%), Gaps = 19/383 (4%)
Strand = Plus / Minus
Query: 1 catggctagggctttgaacattgagctgagcccaggcctcacaacctttctggagactct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 catggctagggctttgaacattgagctgagcccaggcctcacaacctttctggagactct 508
Query: 61 tgaagaacatgaagtgccctgtctaccgtgggcattgccgagaaggtcaaat-------- 112
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tgaagaacatgaagtgccctgtctaccgtgggcattgccgagaaggtcaaatggaatgaa 448
Query: 113 ------gggctgtcccgctcacgccaccaatgagacatggcaaaatgacaagccaggggc 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gagtcagggctgtcccgctcacgccaccaatgagacatggcaaaatgacaagccaggggc 388
Query: 167 tggtcttctgtggcccacctcaccctctctcccctcagggtgtctctccccatctgtcat 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tggtcttctgtggcccacctcaccctctctcccctcagggtgtctctccccatctgtcat 328
Query: 227 aaataagcagacagggggtctagagagatggctcattggttaagagcacttcccgctctt 286
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aaataagcagacaggggg-ctggagagatggctcattggttaagagcacttcccgctctt 269
Query: 287 ccagaggtcatgagttcaattctcagcaaccacatggtggctcacaaccatctgtaatgg 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ccagaggtcatgagttcaattctcagcaaccacatggtggctcacaaccatctgtaatgg 209
Query: 347 gatcgagtgccctttttctggtg 369
|||||||||||||||||||
Sbjct: 208 ----gagtgccctttttctggtg 190
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 369
Length of database: 769
Length adjustment: 9
Effective length of query: 360
Effective length of database: 760
Effective search space: 273600
Effective search space used: 273600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|