Query= MSMg01no354_i14.b1 MSMg01no354_i14.b1 CHROMAT_FILE:
MSMg01no354_i14.b1 PHD_FILE: MSMg01no354_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:43 2005
(354 letters)
>mm_chr2_33196587_33197340
Length = 754
Score = 627 bits (324), Expect = 0.0
Identities = 344/351 (98%), Gaps = 2/351 (0%)
Strand = Plus / Plus
Query: 5 gaattcttccaa-tgcctcttctcccttccagaatcccaagggaagccttttaatcctgc 63
|||||||||||| | | ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 205 gaattcttccaact-catcttctcccttccagtatcccaagggaagccttttaatcctgc 263
Query: 64 ccattttctatggaggaaaactgaggttcacggaggtcatgctctgatgcatttgcgtat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccattttctatggaggaaaactgaggttcacggaggtcatgctctgatgcatttgcgtat 323
Query: 124 tctatccagcagcagcaggacccaccagccatctgaagatcaggnctggttactctgcct 183
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 324 tctatccagcagcagcaggacccaccagccatctgaagatcaggtctggttactctgcct 383
Query: 184 ggactgctcatgcgcacatgctccagagagcatctatcagccgcccagaacactgacaag 243
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 384 ggactgctcatgcgcacatgctccagagagcatctatcaaccgcccagaacactgacaag 443
Query: 244 atggaagctgactgcgcttaccagagggtatgtgccttgagctagggtggcaaggaggaa 303
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 444 atggaagctgactgcgcttaccagagggtaggtgccttgagctagggtggcaaggaggaa 503
Query: 304 gatggatggaagacagcacaagtgagaacagccagactagaccagctgttt 354
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gatggatggaagacagcacaagtgagaacagccagactagaccagctgttt 554
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 754
Length adjustment: 9
Effective length of query: 345
Effective length of database: 745
Effective search space: 257025
Effective search space used: 257025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no354_i14.g1 MSMg01no354_i14.g1 CHROMAT_FILE:
MSMg01no354_i14.g1 PHD_FILE: MSMg01no354_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:47:43 2005
(245 letters)
>mm_chr2_33391034_33391678
Length = 645
Score = 456 bits (236), Expect = e-133
Identities = 242/244 (99%)
Strand = Plus / Minus
Query: 1 cctggagacgttgatctgaatgagggaggacagaagaaataaacctgtagctgagtcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cctggagacgttgatctgaatgagggaggacagaagaaataaacctgtagctgagtcctt 385
Query: 61 ggagattttctatgggggagcacagagaggaagaatagaggaaaacagtctagacctctg 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 384 ggagattttctatgggggagcacagagagaaagaatagaggaaaacagtctagacctctg 325
Query: 121 agacatcaccacgtgtgtcatatacacaagtggggattcgagaaggaggtggggagggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agacatcaccacgtgtgtcatatacacaagtggggattcgagaaggaggtggggagggag 265
Query: 181 gaaaagagaggctgagagactgagacttggaaaagcaatggccttaaaccacccatgttt 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 264 gaaaagagaggctgagagactgagacttggaaaagcaaaggccttaaaccacccatgttt 205
Query: 241 gatg 244
||||
Sbjct: 204 gatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
