Query= MSMg01no355_a19.b1 MSMg01no355_a19.b1 CHROMAT_FILE:
MSMg01no355_a19.b1 PHD_FILE: MSMg01no355_a19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:23 2005
(563 letters)
>mm_chr2_180112517_180113477
Length = 961
Score = 1033 bits (534), Expect = 0.0
Identities = 553/560 (98%), Gaps = 2/560 (0%)
Strand = Plus / Plus
Query: 4 ggaattcagcttcttgaagctgtggagtagatagccttgtttctgcaaggctatgcagaa 63
||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagcttcttgaagctatggaatagatagccttgtttctgcaaggctatgcagaa 263
Query: 64 acagttcccctggagctatggacaaggactgtgcttcacattcacaaggcttctgggcag 123
||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 264 acagttcccctggagctatgggcaaggactg--cttcacattcacaaggcttctgggcag 321
Query: 124 agttcagatcatggctgctccctccattcaggccagacccactcctcctcacatcccttc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 agttcagatcatggctgctccctccattcaggccagacccactcctcctcacatcccttc 381
Query: 184 tgataactacaggttaaggagttgtgtgagtgattaacaaccagggttctagagattttg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tgataactacaggttaaggagttgtgtgagtgattaacaaccagggttctagagattttg 441
Query: 244 gagttttcagaggaagctgggaagcagagtagagtccctcagcttctgatgagctggaga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gagttttcagaggaagctgggaagcagagtagagtccctcagcttctgatgagctggaga 501
Query: 304 gcagcatcttcaacatcctaggctgagatggatgaaggttccagagagccatgcctgtgg 363
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 502 gcagtatcttcaacatcctaggctgagatggatgaaggttccagagagccatgcttgtgg 561
Query: 364 gttctccccagccttgatggcctagctctttcttaaggctgagcccttggtctgatcctg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gttctccccagccttgatggcctagctctttcttaaggctgagcccttggtctgatcctg 621
Query: 424 tagctctggctttccaagcccaggcttctgacacaaagatttcctgagggagcctcaagc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tagctctggctttccaagcccaggcttctgacacaaagatttcctgagggagcctcaagc 681
Query: 484 tgcagtggggtagtctccagatgaggacactcactaccacaagcctgctttctacacaaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tgcagtggggtagtctccagatgaggacactcactaccacaagcctgctttctacacaaa 741
Query: 544 aagatactcgaggactccaa 563
||||||||||||||||||||
Sbjct: 742 aagatactcgaggactccaa 761
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 961
Length adjustment: 10
Effective length of query: 553
Effective length of database: 951
Effective search space: 525903
Effective search space used: 525903
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_a19.g1 MSMg01no355_a19.g1 CHROMAT_FILE:
MSMg01no355_a19.g1 PHD_FILE: MSMg01no355_a19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:24 2005
(537 letters)
>mm_chr2_180335969_180336905
Length = 937
Score = 859 bits (444), Expect = 0.0
Identities = 444/444 (100%)
Strand = Plus / Minus
Query: 1 ctaccctgatggccttgtgagccacctgggaacctaaccttgggacagcagctattggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctaccctgatggccttgtgagccacctgggaacctaaccttgggacagcagctattggaa 385
Query: 61 ttagacacttacccgttctccaggggcacctttgggtcctgcgggtccatctctccctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttagacacttacccgttctccaggggcacctttgggtcctgcgggtccatctctccctgt 325
Query: 121 cagaccctggagagggaggcggagagtgggctcaagacgccaccaaatgagaagcacatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cagaccctggagagggaggcggagagtgggctcaagacgccaccaaatgagaagcacatg 265
Query: 181 ccatgccacaggaagaatgagccacagactcttaactatgaacccagagacacagtacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccatgccacaggaagaatgagccacagactcttaactatgaacccagagacacagtacat 205
Query: 241 acactgaactggctagttgtctgtcaacttgacacagctggagttatcacagagaaagga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 acactgaactggctagttgtctgtcaacttgacacagctggagttatcacagagaaagga 145
Query: 301 gcttcagttaaggaaatgcctccatgagatccaactgtaaggcattttctcaattagtga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 gcttcagttaaggaaatgcctccatgagatccaactgtaaggcattttctcaattagtga 85
Query: 361 tcaaggaggaaaggccccttgtgggtgggaccatctctgggctggtagtcttgggctcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tcaaggaggaaaggccccttgtgggtgggaccatctctgggctggtagtcttgggctcta 25
Query: 421 taagagagcaggctgagcaagcca 444
||||||||||||||||||||||||
Sbjct: 24 taagagagcaggctgagcaagcca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
