Query= MSMg01no355_b06.b1 MSMg01no355_b06.b1 CHROMAT_FILE:
MSMg01no355_b06.b1 PHD_FILE: MSMg01no355_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:26 2005
(327 letters)
>mm_chr2_17558549_17559278
Length = 730
Score = 567 bits (293), Expect = e-166
Identities = 318/327 (97%), Gaps = 3/327 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcacaatcctgctacctgcttagtg--gagaattccagtgttacacaaaatag 61
||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 530 ggaattcacacaatcctgctacctgcttagtggagagaattccagtgttacacaaaatag 471
Query: 62 ta-tttttggcttctggctgactccttctagagatgttgtatttattgcttcctgtgtca 120
|| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tattttttagcttctggctgactccttctagagatgttgtatttattgcttcctgtgtca 411
Query: 121 attagctacttgccgtcatagcgaaatacataggtcactcatgaaacagagaggattgct 180
|||||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 410 attagctacttgccattatagcaaaatacataggtcactcatgaaacagagaggattgct 351
Query: 181 ttgctcttggttagatccaagattgggcaggatgtagtttctggtctctggtgagaacac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ttgctcttggttagatccaagattgggcaggatgtagtttctggtctctggtgagaacac 291
Query: 241 agcgttctgatggaagaaagtggggtggggatgggtggagtcctaccctctcctcaaaag 300
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 290 agcgttctgatggaagaaagtggggtggggatgggtggagtcctatcctctcctcaaaag 231
Query: 301 gtccatctccctgcctcaagtgttctg 327
|||||||||||||||||||||||||||
Sbjct: 230 gtccatctccctgcctcaagtgttctg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 730
Length adjustment: 9
Effective length of query: 318
Effective length of database: 721
Effective search space: 229278
Effective search space used: 229278
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no355_b06.g1 MSMg01no355_b06.g1 CHROMAT_FILE:
MSMg01no355_b06.g1 PHD_FILE: MSMg01no355_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:48:26 2005
(412 letters)
>mm_chr2_17383925_17384736
Length = 812
Score = 781 bits (404), Expect = 0.0
Identities = 410/412 (99%)
Strand = Plus / Plus
Query: 1 ttttcgtttgttataaacttgtcctgtaaggagaatttgcgatctgtaagtttccctcat 60
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 201 ttttcgtttgttataaacttgtcctgtaaggagaatttgcaatctataagtttccctcat 260
Query: 61 gtcctctccctaaggctgtcttttgcttctgtagaggctcctctgtgctaccttcaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcctctccctaaggctgtcttttgcttctgtagaggctcctctgtgctaccttcaggaa 320
Query: 121 ggaaatgctttctacggaggaataatttctaaaaacttttcttgcaaaccttcagaagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaaatgctttctacggaggaataatttctaaaaacttttcttgcaaaccttcagaagta 380
Query: 181 cataggaaaaaatatcccaacgctgtccaagatgaacctcttagcttccacttcagatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cataggaaaaaatatcccaacgctgtccaagatgaacctcttagcttccacttcagatga 440
Query: 241 caatgctcatgttgctttgggtgatgtctgtttccatagtgaatggcgtgcctgaggctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caatgctcatgttgctttgggtgatgtctgtttccatagtgaatggcgtgcctgaggctt 500
Query: 301 aagcaggatttcttctcatcttcaatcttgctgtgagttcttaatggttcttcgctgggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagcaggatttcttctcatcttcaatcttgctgtgagttcttaatggttcttcgctgggc 560
Query: 361 tgcaataaaataatcagttaacctttaatgcacaaaagtttcaaagacacac 412
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcaataaaataatcagttaacctttaatgcacaaaagtttcaaagacacac 612
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
