ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCTATCATCTGAACTGACAATTTTTCCTCCAACAATTTTCCTTCCAATAG
AAGACTATCTATCAAAAATTCCAACATTGGGCATCAGAAGCTATTTTTTG
AGTTGTTGTTCAACACTAAGAGACATCCAAAGTTTTACAGGAGTTTGATG
TTGCCCTTTGTTTGCCTTCCAGAAACTGAATTTAAGTCCCTAATGCTGAG
GACACCGTTCACTTCAGACACAGGACCCAAAGGACTCAAACTGGATCTAA
TATGAATTCCTCCTTTTTTAGGACTAGCTTTCATGGTAAGAGATGGTACC
ATGCAAACTTAAAAAAAAAAAAAGGAGAACAATAGTCCTACCCAGCTGTG
ATGCTTATGAACCATAACAACAACCAACATGGTACAGTAATCCTCAGGGT
ATAGAAATGGCATGAATACCTAGATGGTAACCAACATATTTGGACTTAAG
ACAATAGAGAAATCAAGGCTAGATCTGGGCTTGCTTTATCATCATCAAAT
CTTACAAAGAAAGTTTGCCCTCTGGGAGTTCTAAAAGGAAGGATTTTTGA
AGATGATGGAGCAAGGGCTCAGTGGTAAAGAGTATACCTAAGCTTTTCCG
AGTATCTGAGTTCAGTTCCATCACCTAATCCTGAGGCTCATAACAGCCTG
TCATTCTGGCTCCCGCCCCCCAAGTACTTCCAGAACAGTTTATACTATTC
TGGCTATCCCAA

TGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCTTTCTCCTTGAATTATTTTTTCTTA
AAAAGAATCATTTAAGCCTTGTAAATTAGAAATAATTTAAGGGAGCATTT
GGTAATTCATGAGCACATAAGCAAGCACATGGGCACACAGTTACATACAA
ACATTACATGTGGCACTATTTGGTGTTCTCATACCAGTTTAGATATGTCT
ACATTCTTTAAATGTTAAAACTTAATATGGAATATGGTGCTTGCATTTTC
TTTATAAAGTTTTTCTTCNGTTATAATTCCTTGAATATTTAGAATTTTAG
ATCCGAAAAACATACAAGCATATATACTGGGATGGTTAATGTTACCATTG
TGACAAGCTGCACAACCACCTGGGAGATGGGTTCATGAGCATGCTTTGAG
AGATTATCTTGACTTGGTTCATTGTGGGCAACGCCATTCCCTAAGAAGGA
GATCCCAGACATACTCAAATGAAGGGGAGCTGGGCTGTAGCATGCTTTCA
TTATTCTCTTTCCTGATGAGGGATGCCCTCTAACCAGGGATTTATGTTTC
CTGAAGAAGGATGCCCGAAGAGTTCCTTCCCCCCTGACTAACTTCCACGG
TGGTTTGTGTTCTTTGAATTCATGCTATAGCTCACATTCTTTTTCTTTAA
ATTGCCCTTTTTTCCAAGAGCCTCATTCCTCCCCTTGGTAATTATACATT
TCCAACCGTCTTTCGTTGTTATCN

Query= MSMg01no355_m12.g1 MSMg01no355_m12.g1 CHROMAT_FILE:
MSMg01no355_m12.g1 PHD_FILE: MSMg01no355_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:19 2005
         (485 letters)



>mm_chr2_140835353_140836237
          Length = 885

 Score =  909 bits (470), Expect = 0.0
 Identities = 481/485 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctttctccttgaattattttttcttaaaaagaatcatttaagccttgtaaattagaaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctttctccttgaattattttttcttaaaaagaatcatttaagccttgtaaattagaaat 260

                                                                       
Query: 61  aatttaagggagcatttggtaattcatgagcacataagcaagcacatgggcacacagtta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatttaagggagcatttggtaattcatgagcacataagcaagcacatgggcacacagtta 320

                                                                       
Query: 121 catacaaacattacatgtggcactatttggtgttctcataccagtttagatatgtctaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catacaaacattacatgtggcactatttggtgttctcataccagtttagatatgtctaca 380

                                                                       
Query: 181 ttctttaaatgttaaaacttaatatggaatatggtgcttgcattttctttataaagtttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctttaaatgttaaaacttaatatggaatatggtgcttgcattttctttataaagtttt 440

                                                                       
Query: 241 tcttcngttataattccttgaatatttagaattttagatccgaaaaacatacaagcatat 300
           ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcttctgatataattccttgaatatttagaattttagatccgaaaaacatacaagcatat 500

                                                                       
Query: 301 atactgggatggttaatgttaccattgtgacaagctgcacaaccacctgggagatgggtt 360
           |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 501 atactgggatggttaatgttaccaatgtgacaagctgtacaaccacctgggagatgggtt 560

                                                                       
Query: 361 catgagcatgctttgagagattatcttgacttggttcattgtgggcaacgccattcccta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catgagcatgctttgagagattatcttgacttggttcattgtgggcaacgccattcccta 620

                                                                       
Query: 421 agaaggagatcccagacatactcaaatgaaggggagctgggctgtagcatgctttcatta 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaaggagatcccagacatactcaaatgaaggggagctgggctgtagcatgctttcatta 680

                
Query: 481 ttctc 485
           |||||
Sbjct: 681 ttctc 685


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 885
Length adjustment: 10
Effective length of query: 475
Effective length of database: 875
Effective search space:   415625
Effective search space used:   415625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)