MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-355M16
Chromosome	2 (Build37)
Map Location	21,843,228 - 21,843,470
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Arhgap21, LOC433408, LOC675912, C130046B21Rik, 4933434I06Rik, Thnsl1, Gpr158
Downstream gene	LOC637235, Myo3a, LOC100041703, Myo3a, Gad2, Apbb1ip, Pdss1, Abi1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Arhgap21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71435 MGI:1918685
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC433408 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433408
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein

name	LOC675912 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675912
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	C130046B21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:442817 MGI:3045281
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	4933434I06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71233 MGI:1918483
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Thnsl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208967 MGI:2139347
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Gpr158 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241263 MGI:2441697
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC637235 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:637235
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 40 ESTs, 3 Proteins pseudo : _no_value

name	Myo3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667663 MGI:2183924
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041703 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041703
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 155 ESTs, 13 Proteins

name	Myo3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667663 MGI:2183924
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gad2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14417 MGI:95634
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Apbb1ip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54519 MGI:1861354
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pdss1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56075 MGI:1889278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abi1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11308 MGI:104913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 5 mRNAs

name	Arhgap21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486928 GeneID:71435 MGI:1918685
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Rho GTPase activating protein 21 transcript_id : NM_001081364.1

name	LOC433408 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149248928 GeneID:433408
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 1 Protein product : similar to TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor transcript_id : XM_488937.5

name	4933434I06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124378031 GeneID:71233 MGI:1918483
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933434I06 gene transcript_id : NM_027728.2

name	Thnsl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68533244 GeneID:208967 MGI:2139347
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : threonine synthase-like 1 (bacterial) transcript_id : NM_177588.2

name	Thnsl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:68533240 GeneID:208967 MGI:2139347
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : threonine synthase-like 1 (bacterial) transcript_id : NM_001001297.2

name	Gpr158 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52350562 GeneID:241263 MGI:2441697
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : G protein-coupled receptor 158 transcript_id : NM_001004761.1

name	Myo3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22380640 GeneID:667663 MGI:2183924
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin IIIA transcript_id : NM_148413.1

name	LOC100041703 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149248946 GeneID:100041703
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 155 ESTs, 13 Proteins product : similar to G protein gamma-5 subunit transcript_id : XM_001477173.1

name	Myo3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22380640 GeneID:667663 MGI:2183924
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin IIIA transcript_id : NM_148413.1

name	Gad2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124517708 GeneID:14417 MGI:95634
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamic acid decarboxylase 2 transcript_id : NM_008078.2

name	Apbb1ip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328064 GeneID:54519 MGI:1861354
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein transcript_id : NM_019456.1

name	Pdss1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:90577180 GeneID:56075 MGI:1889278
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : prenyl (solanesyl) diphosphate synthase, subunit 1 transcript_id : NM_019501.3

name	Abi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116089350 GeneID:11308 MGI:104913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : abl-interactor 1 transcript_id : NM_001077193.1

name	Abi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116089342 GeneID:11308 MGI:104913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : abl-interactor 1 transcript_id : NM_001077192.1

name	Abi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116089346 GeneID:11308 MGI:104913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : abl-interactor 1 transcript_id : NM_007380.2

name	Abi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116089344 GeneID:11308 MGI:104913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : abl-interactor 1 transcript_id : NM_145994.1

name	Abi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116089340 GeneID:11308 MGI:104913
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : abl-interactor 1 transcript_id : NM_001077190.1

name	Arhgap21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486929 GeneID:71435 MGI:1918685
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : Rho GTPase activating protein 21 protein_id : NP_001074833.1

name	LOC433408 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94366039 GeneID:433408
definition	codon_start : 1 product : hypothetical protein protein_id : XP_488937.4

name	4933434I06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313146 GeneID:71233 MGI:1918483
definition	GO_function : GO:0005516 - calmodulin binding [Evidence IEA] codon_start : 1 product : enkurin protein_id : NP_082004.1

name	Thnsl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29243946 CCDS:CCDS15720.1 GeneID:208967 MGI:2139347
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0004765 - shikimate kinase activity [Evidence IEA]; GO:0004795 - threonine synthase activity [Evidence IEA] GO_process : GO:0008652 - amino acid biosynthesis [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0009088 - threonine biosynthesis [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : threonine synthase-like 1 isoform a protein_id : NP_808256.1

name	Thnsl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47604972 CCDS:CCDS15721.1 GeneID:208967 MGI:2139347
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0004765 - shikimate kinase activity [Evidence IEA]; GO:0004795 - threonine synthase activity [Evidence IEA] GO_process : GO:0008652 - amino acid biosynthesis [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0009088 - threonine biosynthesis [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : threonine synthase-like 1 isoform b protein_id : NP_001001297.1

name	Gpr158 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52350563 CCDS:CCDS15722.1 GeneID:241263 MGI:2441697
definition	GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : G protein-coupled receptor 158 protein_id : NP_001004761.1

name	Myo3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22380641 GeneID:667663 MGI:2183924
definition	codon_start : 1 exception : unclassified translation discrepancy product : myosin IIIA protein_id : NP_680779.1

name	LOC100041703 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149248947 GeneID:100041703
definition	codon_start : 1 product : similar to G protein gamma-5 subunit protein_id : XP_001477223.1

name	Myo3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22380641 GeneID:667663 MGI:2183924
definition	codon_start : 1 exception : unclassified translation discrepancy product : myosin IIIA protein_id : NP_680779.1

name	Gad2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124517709 CCDS:CCDS15724.1 GeneID:14417 MGI:95634
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0045202 - synapse [Evidence IDA] GO_function : GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0004351 - glutamate decarboxylase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA] GO_process : GO:0019752 - carboxylic acid metabolism [Evidence IEA]; GO:0042136 - neurotransmitter biosynthesis [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IEA] codon_start : 1 note : glutamate decarboxylase 65 product : glutamic acid decarboxylase 2 protein_id : NP_032104.2

name	Apbb1ip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328065 GeneID:54519 MGI:1861354
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : proline-rich protein 48 product : amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein protein_id : NP_062329.1

name	Pdss1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:90577181 GeneID:56075 MGI:1889278
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0046982 - protein heterodimerization activity [Evidence IDA]; GO:0000010 - trans-hexaprenyltranstransferase activity [Evidence IDA]; GO:0050347 - trans-octaprenyltranstransferase activity [Evidence IPI]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008299 - isoprenoid biosynthesis [Evidence IEA] [Evidence IDA]; GO:0051290 - protein heterotetramerization [Evidence IPI]; GO:0006744 - ubiquinone biosynthesis [Evidence IDA] [Evidence IPI] codon_start : 1 note : subunit 1 of solanesyl diphosphate synthase; trans-prenyltransferase product : prenyl diphosphate synthase, subunit 1 protein_id : NP_062374.2

name	Abi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116089351 GeneID:11308 MGI:104913
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0030296 - protein tyrosine kinase activator activity [Evidence IDA] GO_process : GO:0050875 - cellular physiological process [Evidence IDA] [Evidence IPI]; GO:0001756 - somitogenesis [Evidence IMP] codon_start : 1 note : isoform 5 is encoded by transcript variant 5; ablphilin-1; eps8 binding protein; spectrin SH3 domain binding protein 1; abelson interactor 1 product : spectrin SH3 domain binding protein 1 isoform 5 protein_id : NP_001070661.1

name	Abi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116089343 GeneID:11308 MGI:104913
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0030296 - protein tyrosine kinase activator activity [Evidence IDA] GO_process : GO:0050875 - cellular physiological process [Evidence IDA] [Evidence IPI]; GO:0001756 - somitogenesis [Evidence IMP] codon_start : 1 note : isoform 4 is encoded by transcript variant 4; ablphilin-1; eps8 binding protein; spectrin SH3 domain binding protein 1; abelson interactor 1 product : spectrin SH3 domain binding protein 1 isoform 4 protein_id : NP_001070660.1

name	Abi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116089347 GeneID:11308 MGI:104913
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0030296 - protein tyrosine kinase activator activity [Evidence IDA] GO_process : GO:0050875 - cellular physiological process [Evidence IDA] [Evidence IPI]; GO:0001756 - somitogenesis [Evidence IMP] codon_start : 1 note : isoform 3 is encoded by transcript variant 3; ablphilin-1; eps8 binding protein; spectrin SH3 domain binding protein 1; abelson interactor 1 product : spectrin SH3 domain binding protein 1 isoform 3 protein_id : NP_031406.2

name	Abi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116089345 GeneID:11308 MGI:104913
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0030296 - protein tyrosine kinase activator activity [Evidence IDA] GO_process : GO:0050875 - cellular physiological process [Evidence IDA] [Evidence IPI]; GO:0001756 - somitogenesis [Evidence IMP] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; ablphilin-1; eps8 binding protein; spectrin SH3 domain binding protein 1; abelson interactor 1 product : spectrin SH3 domain binding protein 1 isoform 2 protein_id : NP_666106.1

name	Abi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116089341 GeneID:11308 MGI:104913
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IEA]; GO:0030027 - lamellipodium [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0030296 - protein tyrosine kinase activator activity [Evidence IDA] GO_process : GO:0050875 - cellular physiological process [Evidence IDA] [Evidence IPI]; GO:0001756 - somitogenesis [Evidence IMP] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; ablphilin-1; eps8 binding protein; spectrin SH3 domain binding protein 1; abelson interactor 1 product : spectrin SH3 domain binding protein 1 isoform 1 protein_id : NP_001070658.1

name	LOC675912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675912
definition	number : 10 pseudo : _no_value

name	LOC675912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675912
definition	number : 9 pseudo : _no_value

name	LOC675912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675912
definition	number : 8 pseudo : _no_value

name	LOC675912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675912
definition	number : 7 pseudo : _no_value

name	LOC675912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675912
definition	number : 6 pseudo : _no_value

name	LOC675912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675912
definition	number : 5 pseudo : _no_value

name	LOC675912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675912
definition	number : 4 pseudo : _no_value

name	LOC675912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675912
definition	number : 3 pseudo : _no_value

name	LOC675912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675912
definition	number : 2 pseudo : _no_value

name	LOC675912 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675912
definition	number : 1 pseudo : _no_value

name	C130046B21Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149248943 GeneID:442817 MGI:3045281
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA C130046B21 gene transcript_id : XR_035323.1

name	LOC637235 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149248930 GeneID:637235
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 40 ESTs, 3 Proteins product : similar to 3-phosphoglycerate dehydrogenase pseudo : _no_value transcript_id : XR_032647.1

clone name	MSMg01-477F16
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-435L20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-377B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372M01
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-535D06
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-062I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-233K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488B13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-275I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-355M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-350F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-322E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215J08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-477L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331H09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270H11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-053M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-204G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-194J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-070J04
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-355M16.T7 (MSMg01no355_m16.b1)	MSMg01-355M16.TJ (MSMg01no355_m16.g1)
ACC	AG466094	AG466095
length	805	804
length of high quality (start - end)	80 (43 - 122)	243 (78 - 320)
definition	CHROMAT_FILE: MSMg01no355_m16.b1 PHD_FILE: MSMg01no355_m16.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:49:20 2005	CHROMAT_FILE: MSMg01no355_m16.g1 PHD_FILE: MSMg01no355_m16.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:49:20 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CAATAATTTGCNNCCGCTATACGACTTCCTATTCGNAGAGGATCCGCGGA ATTCCATGCCTATATCTAAACATGATAAATGCAATCTATAGCAAACCAGT AACCAACATCAAAGTAAATGGTGAGAATCTGGAAGCATCCTGTAATAAAA TGAAATAGAAGGGGGTTGACGTTTTAGTGTAGGGGGCGGGCTNNNNANNA CTTGAAATCCTTACCCCAAAAATTTCAACACCNAAGGAAACCCNGGGACA TTGAAGAAACAAATCTTTTGAAAATTTAATTAGGCCTAATTCCAAAATTT ATTAAAACTTTGAAAAGGGAAATAATAAAAAAAGTTTTTCTAAAAAAATG AAAAAAAAAAAAAACCTTCTAAAAAAAAAAATTTTTTTTCTAAAAAAAAA TAAAAAATCTCTCAAAAAAAAAAAAAAAAAACCCTCCCGGGGNAAAAAAA GCTTTTCCCTTAAAATTCCCCCCCCCCCTTCTCTNNNNTTTTTTCCNCAA TACCTCCTTTCCCATTTCTCCCCCTCCCCCCCCCNNCCCCCCTCATCATA ACACCCCCCCCCCCTCCCNCCCCCCCCNNGCCCCCCCCCCCCCCCTCCCC CCCCCCCCTCTTCCCCCCCCTTNCCCCCTTCNNCTTNNCCCCCNNNTNNT TNTTTTTTTCCTTTTTTTCNCCCCNCTCCTCTCCCTCCCCTATACTATTC CCTTTTATTTTCCTTTTTTCCCTTCTCCCTCCCNNNCTTTCCNCCCTCCC CCCCCCCNCCNCCCCCTCTTTCTCCTTTTTCTTTTCTTTATTTTGTTTTA TTTTG	NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXAGTGCTATAAACAATTTGACTCA ACCCCATAAAGAAATGTAAGATAAACTTGTATCATTTTATATGATTCTGT AATTGATACCTATATCTCAAATTGTGGACTTCTAAACTCACAGTTAGGCC AGAGCCCAAAACCTCAGGCATCCTCTGCAATTAGCCGTGGACCCTCAGCA CACTTAGCCTAACTCATGTGCTCTGCAAAGGGCTTTTACTTTCCATTTGG GGAATGAGTGTAAGGAGCATGATATTAATGTAATCTAATTGTCTGATCTT TCAAGTCATCTAATTAATCAAACCAGAGCAGACTGGCCTGTGATCTACTT GATCTGAATATGAAACCTAATGGATTGATTAATTTAGAAAATTAATTCTT ATGGACCCCCTAATGCTTTCCCAAGGCAAAAATGAATGGCCTTTTAAGAA AAAATTTTCAAGCCTTTTCTTTTCTTTCCAAGGGGGGGGGTGGAAAGTTA AAAAAAAAAAAAAAAAAACCCCCAAATCTTTGGTGTTTTTTAATTTGGGG CACCCGAAAAGGGAAAAAACCCCTCTTCCTCTTTTGGTTGGGAAAATACC CCCCTGTTAAAGAAAAAAAAAATAAATTTCCCCCCGGGGTTTTNGGGCGC GAAATACTCCTGTGTGTCTGGGTGAAACCCCTCCCCACCCTCTTGGGGTC TCCTAAAAAACTCCCTCTTTTATAATCTCCCCCCCGGATAAAAAAGAGAT ACAC
quality values	Open. Hide. 8 8 8 8 8 17 19 37 23 27 3 0 0 3 19 25 23 25 25 28 25 25 37 24 9 9 9 9 19 12 15 9 9 9 3 0 3 23 23 19 19 10 12 12 27 29 59 59 30 26 26 30 32 33 33 33 23 21 11 9 11 11 10 23 24 37 37 39 32 32 25 30 30 30 37 37 37 33 44 36 36 38 36 47 41 50 59 50 47 41 39 39 39 37 35 30 29 32 14 9 9 9 9 9 15 28 37 37 37 37 39 34 39 43 59 41 29 29 28 19 22 24 27 18 17 13 14 13 13 19 8 8 6 6 6 8 9 9 10 9 6 6 6 6 6 6 6 8 6 7 8 8 8 8 8 8 8 6 6 6 6 6 9 7 6 8 8 11 9 11 11 12 12 8 8 8 6 6 6 6 6 10 15 10 12 12 10 9 7 6 6 3 0 0 0 0 3 0 0 3 10 10 12 13 13 16 17 11 11 11 10 10 9 10 16 12 12 7 7 7 6 6 6 7 6 9 8 6 9 9 7 3 0 3 10 9 12 13 15 14 18 18 3 0 3 11 8 7 7 7 9 9 9 9 11 11 10 12 10 13 10 12 10 10 8 8 9 11 8 8 8 8 8 13 15 10 9 9 9 9 9 9 10 8 8 8 8 8 8 12 10 10 10 9 14 11 25 24 15 13 8 8 8 8 7 8 7 8 8 9 8 8 8 10 8 10 11 11 11 11 7 6 6 6 6 6 6 8 15 16 10 9 8 8 8 9 12 7 6 6 6 6 6 19 19 17 14 10 9 8 8 8 10 11 11 17 17 25 27 24 15 13 8 8 8 8 8 8 8 8 8 14 12 13 13 27 21 15 10 9 9 10 10 15 17 16 14 13 6 6 6 6 8 8 15 26 16 9 8 8 8 8 8 11 9 8 8 8 8 8 8 6 9 9 19 14 13 16 12 12 16 13 18 21 18 18 22 23 15 9 9 6 6 6 6 6 6 7 9 10 10 3 0 3 8 8 17 22 13 8 8 6 6 11 7 8 8 10 12 10 10 10 10 10 10 12 10 15 28 28 30 22 21 10 10 8 9 8 8 8 8 8 8 3 0 0 0 0 3 7 7 8 19 10 10 3 0 3 8 8 10 8 22 17 20 17 20 16 20 14 10 10 8 6 6 8 6 8 10 22 19 15 11 8 8 8 8 8 8 8 8 19 17 3 0 0 3 23 21 9 9 12 19 8 8 8 8 8 9 11 9 11 9 12 12 13 19 10 10 12 17 19 10 10 9 9 13 3 0 3 21 10 10 9 19 21 3 0 0 3 17 14 9 9 9 9 9 24 24 12 12 12 12 18 19 11 10 10 23 21 29 19 9 8 8 8 8 21 21 18 13 9 9 9 9 19 22 15 8 6 6 3 0 3 17 27 23 23 9 12 3 0 0 3 23 3 0 0 3 14 15 18 3 0 0 0 3 0 0 3 3 0 3 13 13 13 11 15 8 8 6 6 15 19 19 12 8 8 3 0 3 8 14 3 0 3 8 8 9 8 10 21 12 13 10 10 12 15 10 10 10 10 12 8 8 6 6 8 8 9 9 9 8 8 8 8 8 11 9 9 9 12 11 11 10 8 10 9 8 8 10 15 22 22 24 20 22 19 11 6 6 8 3 0 0 0 3 7 7 7 7 3 0 3 17 13 11 8 15 6 6 8 15 15 13 13 3 0 3 3 0 3 14 7 9 9 9 19 16 40 23 23 8 8 11 13 20 22 18 9 9 9 15 10 10 10 10 10 8 9 8 12 10 9 9 9 13 16 11 11 11 12 11 9 9	Open. Hide. 0 3 8 8 15 13 8 8 8 8 15 19 30 30 32 35 36 36 37 32 37 44 44 44 44 44 39 39 44 27 23 14 12 11 11 9 9 9 15 10 10 13 13 22 21 32 43 48 48 44 38 36 36 33 33 33 50 42 39 21 15 14 10 10 10 12 13 22 25 40 40 24 26 35 35 35 35 36 36 36 53 53 53 57 57 57 53 53 53 53 53 53 68 68 68 68 47 47 42 42 42 50 54 54 54 54 54 54 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 51 50 50 50 68 68 51 51 68 68 51 51 50 50 50 51 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 68 57 59 59 68 68 68 59 59 59 59 68 59 57 68 68 68 57 57 57 53 50 48 50 48 57 47 47 42 47 47 47 59 59 59 59 50 48 41 47 47 41 59 41 41 37 37 39 39 39 39 39 47 47 47 50 59 59 59 59 59 47 47 44 44 37 37 44 37 37 44 59 37 37 37 37 37 37 44 37 32 31 32 37 37 43 41 41 44 32 29 27 32 37 37 37 37 36 32 28 36 36 35 34 34 18 16 12 15 11 12 12 11 15 15 15 21 12 12 14 23 28 41 41 32 37 29 29 25 23 23 24 24 23 23 23 30 25 25 24 14 14 16 14 15 21 18 28 28 28 28 31 31 28 17 12 8 8 8 9 9 9 11 11 11 12 12 11 11 11 10 8 8 10 11 8 10 9 9 9 16 12 12 11 11 21 15 17 22 14 14 14 13 17 12 12 13 13 10 9 9 8 8 8 8 10 8 8 8 10 10 13 11 11 10 17 12 9 9 12 8 8 8 7 7 7 9 9 9 9 8 8 8 8 8 8 7 7 7 8 9 12 12 15 11 12 10 8 8 8 8 8 8 8 8 8 11 9 10 8 8 8 8 8 8 10 18 13 8 8 8 9 10 11 13 14 10 11 10 10 10 10 8 8 8 8 8 16 13 12 10 9 9 12 9 9 8 8 6 6 6 8 8 12 8 9 10 12 10 15 10 10 8 8 8 8 8 8 8 8 8 9 10 11 8 8 8 8 8 8 8 8 8 8 10 10 10 10 15 26 27 43 59 47 41 37 23 24 23 21 15 23 16 12 9 8 9 9 15 8 10 8 10 8 8 9 9 9 12 11 11 11 11 11 21 23 14 11 11 11 11 9 11 9 9 9 11 10 10 9 8 8 8 8 9 12 19 9 9 9 10 10 16 18 13 9 8 8 8 8 8 8 8 6 8 8 8 8 8 8 9 10 10 8 8 11 11 10 15 10 12 10 10 8 8 8 9 9 14 9 10 9 9 9 9 10 10 18 11 11 11 15 8 9 8 17 10 13 13 10 11 11 11 21 8 8 8 8 8 9 14 8 8 8 8 8 9 10 17 14 3 0 3 12 6 6 6 6 6 8 11 8 8 8 8 11 9 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 11 10 10 7 7 7 8 8 11 8 8 8 8 10 8 10 10 10 11 9 6 6 6 6 7 9 15 9 8 8 7 12 12 12 12 10 9 9 9 10 10 15 14 8 8 8 8 9 9 9 9 9 12 9 9 9 8 6 8 6 6 7 11 11 18 10 10 6 6 6 6 7 10 10 10 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no355_m16.g1 MSMg01no355_m16.g1 CHROMAT_FILE:
MSMg01no355_m16.g1 PHD_FILE: MSMg01no355_m16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:20 2005
         (243 letters)



>mm_chr2_21843028_21843670
          Length = 643

 Score =  400 bits (207), Expect = e-116
 Identities = 234/243 (96%)
 Strand = Plus / Minus

                                                                       
Query: 1   agtgctataaacaatttgactcaaccccataaagaaatgtaagataaacttgtatcattt 60
           |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 443 agtgctatgaacaatttgactcaaccccataaagaaatgtaagacaaacttgtatcattt 384

                                                                       
Query: 61  tatatgattctgtaattgatacctatatctcaaattgtggacttctaaactcacagttag 120
           |||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 383 tatatgattctgtaaccgatacctatatctcaaattgtggacttctaaactcagagttag 324

                                                                       
Query: 121 gccagagcccaaaacctcaggcatcctctgcaattagccgtggaccctcagcacacttag 180
           |||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||
Sbjct: 323 gccagagcccaaaacctcaggcatcctctgcaatcagccgtggaccctgagcccacttag 264

                                                                       
Query: 181 cctaactcatgtgctctgcaaagggcttttactttccatttggggaatgagtgtaaggag 240
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cctaactcatgtgctctgcaaggggcttttactttccatttggggaatgagtgtaaggag 204

              
Query: 241 cat 243
           |||
Sbjct: 203 cat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space:   148356
Effective search space used:   148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information