Query= MSMg01no357_c21.b1 MSMg01no357_c21.b1 CHROMAT_FILE:
MSMg01no357_c21.b1 PHD_FILE: MSMg01no357_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:06 2005
(535 letters)
>mm_chr2_37432973_37433907
Length = 935
Score = 1011 bits (523), Expect = 0.0
Identities = 529/531 (99%)
Strand = Plus / Plus
Query: 5 ggaattcaatctatgttcccacataactcacctcctaccagcctgggactcaacctgtcc 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ggaattcaatctatgtttccacataactcacctcctaccagcctgggactcaacctgtcc 264
Query: 65 accctcttctgtgatcaagtctttgcaagcatgtgtgagccagcacttccatggtagata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 accctcttctgtgatcaagtctttgcaagcatgtgtgagccagcacttccatggtagata 324
Query: 125 caagccctttactcagttgagcagcagtaacttcaccatcaacacacttgtccttgtaat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caagccctttactcagttgagcagcagtaacttcaccatcaacacacttgtccttgtaat 384
Query: 185 aaaaagaaacttcccaattgtatccaaataggtagataaacagatagagatagaaataga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aaaaagaaacttcccaattgtatccaaataggtagataaacagatagagatagaaataga 444
Query: 245 atagtaatgccctaagagtatcagatagaaggaaggcatcatatgctgatgagtgtacat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atagtaatgccctaagagtatcagatagaaggaaggcatcatatgctgatgagtgtacat 504
Query: 305 gtgttccaccgaatgtcccagcatgaaataaggtacaagaaatcgaatgccccagcataa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgttccaccgaatgtcccagcatgaaataaggtacaagaaatcgaatgccccagcataa 564
Query: 365 cacaaggtacaagaactcctcatagaaaatgagtcaacagcatcctaagcatgcttccta 424
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 565 cacaaggtacaagaactcctcaaagaaaatgagtcaacagcatcctaagcatgcttccta 624
Query: 425 taataacttgttctttaccaacaaacacacaagccttgaaaacttgattctggctgttgt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 taataacttgttctttaccaacaaacacacaagccttgaaaacttgattctggctgttgt 684
Query: 485 agatttttttattactaaagtatgggtaggaaacttgaattggcaggtaga 535
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agatttttttattactaaagtatgggtaggaaacttgaattggcaggtaga 735
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space: 485625
Effective search space used: 485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_c21.g1 MSMg01no357_c21.g1 CHROMAT_FILE:
MSMg01no357_c21.g1 PHD_FILE: MSMg01no357_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:06 2005
(425 letters)
>mm_chr2_37582239_37583063
Length = 825
Score = 768 bits (397), Expect = 0.0
Identities = 422/431 (97%), Gaps = 6/431 (1%)
Strand = Plus / Minus
Query: 1 catctgtactaggcatatatgtggtttacacacatacctgcaggcaaaacactcgcacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 catctgtactaggcatatatgtggtttacacacatacctgcaggcaaaacactcgcacaa 452
Query: 61 aataaataaaaatcattt--gtctgtacttatgtacatttgtgcatacattaaaattaca 118
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aataaataaaaatcatttaagtctgtacttatgtacatttgtgcatacattaaaattacg 392
Query: 119 tttatataagaatgcctaataacaagaagattactgctatttgtttctttgtttttgctt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tttatataagaatgcctaataacaagaagattactgctatttgtttctttgtttttgctt 332
Query: 179 ccaggttctgggaatccaaaagagggctgcaagtgctttacacctggaggctgagctgag 238
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ccgggttctgggaatccaaaagagggctgcaagtgctttacacctggaggctgagctgag 272
Query: 239 tgtagcgccacatgcctggactccagccttgggaggtgggggatgaggacatccttggct 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tgtagcgccacatgcctggactccagccttgggaggtgggggatgaggacatccttggct 212
Query: 299 atgtagtaaggttaagatcagcctgggctacgtgcaactgaaaaaagaaaaagaaagaga 358
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 211 atgtagtaaggttaagatcagcctgggctacgtgcaaatgaaaaaagaaaaagaaagaga 152
Query: 359 gagagagagagagagagagagagagagagagagagagagagag-ga-aga-a-aggaaga 414
||||||||||||||||||||||||||||||||||||||||||| || ||| | |||||||
Sbjct: 151 gagagagagagagagagagagagagagagagagagagagagagagagagagagaggaaga 92
Query: 415 aaggaaggaag 425
|||||||||||
Sbjct: 91 aaggaaggaag 81
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 80
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
