Query= MSMg01no358_c17.b1 MSMg01no358_c17.b1 CHROMAT_FILE:
MSMg01no358_c17.b1 PHD_FILE: MSMg01no358_c17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:22 2005
(109 letters)
>mm_chr2_48009821_48010328
Length = 508
Score = 195 bits (101), Expect = 5e-55
Identities = 104/105 (99%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 5 gaattcttctttttgggttctcttcccactgagatatgatacgccccttacattctagcc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 gaattcttctttttgggttctcttcccactgagatatgatacgccccttacattctagcc 249
Query: 65 ccctgggaattgtatagcacaaactaatctctgtccaaacatttc 109
||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 248 ccctgggaattgtatagcacaaact-atctctgtccaaacatttc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 109
Length of database: 508
Length adjustment: 8
Effective length of query: 101
Effective length of database: 500
Effective search space: 50500
Effective search space used: 50500
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no358_c17.g1 MSMg01no358_c17.g1 CHROMAT_FILE:
MSMg01no358_c17.g1 PHD_FILE: MSMg01no358_c17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:22 2005
(549 letters)
>mm_chr2_47852111_47853059
Length = 949
Score = 1054 bits (545), Expect = 0.0
Identities = 548/549 (99%)
Strand = Plus / Plus
Query: 1 ttagaatattctgctaccaaaaaataacacaagcagagatcagatgcccttgctcttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttagaatattctgctaccaaaaaataacacaagcagagatcagatgcccttgctcttgtt 260
Query: 61 atagtacatttttagaactaagcagctgattttattttctgatgaaataaatctgtaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atagtacatttttagaactaagcagctgattttattttctgatgaaataaatctgtaagt 320
Query: 121 tttaattgtactgtgagagagtgaaaaaaatcccatttgcaattgaatccaattacgact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttaattgtactgtgagagagtgaaaaaaatcccatttgcaattgaatccaattacgact 380
Query: 181 catttgtaattaagatttggtctttaatattgatggatttgtattgttttcttgttgttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catttgtaattaagatttggtctttaatattgatggatttgtattgttttcttgttgttc 440
Query: 241 tcgatggagaattcaatatgagcaatatattgaacaaagagtacacaaatgaccattgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcgatggagaattcaatatgagcaatatattgaacaaagagtacacaaatgaccattgtt 500
Query: 301 tctttacactataaatattggatgggattcatattgtaactacaaaaagagtcgtttgtt 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctttacactacaaatattggatgggattcatattgtaactacaaaaagagtcgtttgtt 560
Query: 361 gagtagtttaaataaaaacatgaatatgcataaataaagagcaccagagcttcttctgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gagtagtttaaataaaaacatgaatatgcataaataaagagcaccagagcttcttctgcc 620
Query: 421 taatggaattccatagaaaagacattacccagcatttacatagagattgcaagtgagaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taatggaattccatagaaaagacattacccagcatttacatagagattgcaagtgagaaa 680
Query: 481 cagttgcctaccttctccagtttccaaacattctctggacaaagcacatgaagagacagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cagttgcctaccttctccagtttccaaacattctctggacaaagcacatgaagagacagt 740
Query: 541 acttcttat 549
|||||||||
Sbjct: 741 acttcttat 749
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space: 506121
Effective search space used: 506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
