Query= MSMg01no358_k17.b1 MSMg01no358_k17.b1 CHROMAT_FILE:
MSMg01no358_k17.b1 PHD_FILE: MSMg01no358_k17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:00 2005
(443 letters)
>mm_chr2_121042730_121043572
Length = 843
Score = 841 bits (435), Expect = 0.0
Identities = 438/439 (99%), Gaps = 1/439 (0%)
Strand = Plus / Plus
Query: 5 gaattccaagacagccaggggtagaaagtgagactcggtctccaaaagaataagaaaaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattccaagacagccaggggtagaaagtgagactcggtctccaaaagaataagaaaaaa 265
Query: 65 agaaaaaaggaaaaaaaaaaaagagagagagagagaaacagaaagaaaaaagaagagaaa 124
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 agaaaaaagg-aaaaaaaaaaagagagagagagagaaacagaaagaaaaaagaagagaaa 324
Query: 125 acaagaagaagccgatcagtcactgatgcgtctcgtttggtttgacgaacgctccaacct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acaagaagaagccgatcagtcactgatgcgtctcgtttggtttgacgaacgctccaacct 384
Query: 185 tcttgactgacccggacactatgcacgtggtctgctcccacctgaacagtaatttgggag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcttgactgacccggacactatgcacgtggtctgctcccacctgaacagtaatttgggag 444
Query: 245 gaggagacatataatcttcaaggaagaaagttacagggaaggtctttccaggccagaagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gaggagacatataatcttcaaggaagaaagttacagggaaggtctttccaggccagaagg 504
Query: 305 ccatttggtgatcacagcgtgtgtccagtgtgtcagggctgaccttcctggctatattga 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ccatttggtgatcacagcgtgtgtccagtgtgtcagggctgaccttcctggctatattga 564
Query: 365 tacctaaacacctcagaaaaaccataagacattacttaagatatggccccagctgttcat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tacctaaacacctcagaaaaaccataagacattacttaagatatggccccagctgttcat 624
Query: 425 taatttcccatttgtggga 443
|||||||||||||||||||
Sbjct: 625 taatttcccatttgtggga 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_k17.g1 MSMg01no358_k17.g1 CHROMAT_FILE:
MSMg01no358_k17.g1 PHD_FILE: MSMg01no358_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:53:00 2005
(445 letters)
>mm_chr2_121206942_121207786
Length = 845
Score = 756 bits (391), Expect = 0.0
Identities = 391/391 (100%)
Strand = Plus / Minus
Query: 55 gatgacttgactgaatggatatctgtgcaccatgtgcatacctggttccctcagagacca 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 gatgacttgactgaatggatatctgtgcaccatgtgcatacctggttccctcagagacca 786
Query: 115 gaagaggaggtcagatgccctgaactggaattagagatggttgtgagcagccatatgaat 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 gaagaggaggtcagatgccctgaactggaattagagatggttgtgagcagccatatgaat 726
Query: 175 gctgggaatcaaacccaggtcctctgggtttggaagagcagcagtcactgttctaatctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gctgggaatcaaacccaggtcctctgggtttggaagagcagcagtcactgttctaatctg 666
Query: 235 ctgagccatccctctagacctgctcataaggtttttttatgcaagaagagatgaccagtc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ctgagccatccctctagacctgctcataaggtttttttatgcaagaagagatgaccagtc 606
Query: 295 tctggacagaccagcttatattgaatgaaatctttctaacccatgaataggattccatgt 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tctggacagaccagcttatattgaatgaaatctttctaacccatgaataggattccatgt 546
Query: 355 gtagagagttttaacttgagaaagaaaaagaaactgcaatgtttacatggcctaatcaag 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gtagagagttttaacttgagaaagaaaaagaaactgcaatgtttacatggcctaatcaag 486
Query: 415 taacagctctctgagtctctctccttacctg 445
|||||||||||||||||||||||||||||||
Sbjct: 485 taacagctctctgagtctctctccttacctg 455
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
