Query= MSMg01no360_e13.b1 MSMg01no360_e13.b1 CHROMAT_FILE:
MSMg01no360_e13.b1 PHD_FILE: MSMg01no360_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:59 2005
(590 letters)
>mm_chr2_41689116_41690105
Length = 990
Score = 1102 bits (570), Expect = 0.0
Identities = 582/586 (99%)
Strand = Plus / Minus
Query: 5 gaattcattttcttaccttataataaatatcataattaatcatcactgtatttatataag 64
|||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 790 gaattcattttcaaaccttataataaacatcataattaatcatcactgtatttatataag 731
Query: 65 gtgcccaaaattatgagggctaattgtaaaaggaaatgtttcagtgcttacatggacgag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gtgcccaaaattatgagggctaattgtaaaaggaaatgtttcagtgcttacatggacgag 671
Query: 125 ttggtgttcatttgacataagtctggattagagtctaggcatctaaatctaattcaaata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ttggtgttcatttgacataagtctggattagagtctaggcatctaaatctaattcaaata 611
Query: 185 ttgcaagctaattactagcatgaaggcattctgatatgcccatattataagaattgcatt 244
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ttgcaagctaattagtagcatgaaggcattctgatatgcccatattataagaattgcatt 551
Query: 245 atgaattttaataaacaggtaccaatgtttgtagttcaaaggtgataccaccaagaggaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 atgaattttaataaacaggtaccaatgtttgtagttcaaaggtgataccaccaagaggaa 491
Query: 305 atccagtgcatgaggtcacatcaaaaatccatagttacagatataagtttcaaagtggac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 atccagtgcatgaggtcacatcaaaaatccatagttacagatataagtttcaaagtggac 431
Query: 365 tactggctattatcagatactaagtcttgtgctagcctctttttcttatgagttaattct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tactggctattatcagatactaagtcttgtgctagcctctttttcttatgagttaattct 371
Query: 425 taaatttcacaacaaatgtgtttatttctaatataatttactttactatagactattgct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 taaatttcacaacaaatgtgtttatttctaatataatttactttactatagactattgct 311
Query: 485 atatatattttaagtattaaagcagattaataaatggcaacattaattcatactttatta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 atatatattttaagtattaaagcagattaataaatggcaacattaattcatactttatta 251
Query: 545 taactgatacccaagtgcacaccattttgcttatcattttctttaa 590
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 taactgatacccaagtgcacaccattttgcttatcattttctttaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no360_e13.g1 MSMg01no360_e13.g1 CHROMAT_FILE:
MSMg01no360_e13.g1 PHD_FILE: MSMg01no360_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:59 2005
(476 letters)
>mm_chr2_41676930_41677806
Length = 877
Score = 876 bits (453), Expect = 0.0
Identities = 471/477 (98%), Gaps = 1/477 (0%)
Strand = Plus / Plus
Query: 1 aaatccatcatttgaaagatcctcagataactttaaatggttatttcaaagtgaattctt 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatccatcatttgaaagatcctcggataactttaaatggttatttcaaagtgaattctt 260
Query: 61 gaacttgttgtagaccatctctacattatttaagagtgataaaatgccagcatttatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaacttgttgtagaccatctctacattatttaagagtgataaaatgccagcatttatttt 320
Query: 121 agttgtttggaaaaatttaagaatatcaatttatgcttaatggagttttaaacttctttc 180
|||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 agttgtttggcaaattttaagaatatcaatttatgcttaatggatttttaaacttctttc 380
Query: 181 aaattgacatggcttcttttt-ggtcatagtaaaatttgtatttcaacataaatttagcc 239
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaattgacatggcttcttttttggtcatagtaaaatttgtatttcaacataaatttagcc 440
Query: 240 agttccaaaatgtggaagaatagtatgtcattacatgccatctgtctttctcagttttat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agttccaaaatgtggaagaatagtatgtcattacatgccatctgtctttctcagttttat 500
Query: 300 taatgagtaggtgtaaatcagctcagagcagaacaattcaaattttaaatgcttctaagg 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caatgagtaggtgtaaatcagctcagagcagaacaattcaaattttaaatgcttctaagg 560
Query: 360 aaatgtatttctaaaaattactcccaaaacattctaaagttaaccaaaccaccatgtatt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaatgtatttctaaaaattactcccaaaacattctaaagttaaccaaaccaccatgtatt 620
Query: 420 aaacaattaacaaggaaaatttgaaaatcagtagaatttatagcaaattatttaatt 476
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaacaattaacaaggaaaatttgaaaatcagtagaatttatagcaaattatttaatt 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 476
Length of database: 877
Length adjustment: 10
Effective length of query: 466
Effective length of database: 867
Effective search space: 404022
Effective search space used: 404022
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
