Query= MSMg01no361_i02.b1 MSMg01no361_i02.b1 CHROMAT_FILE:
MSMg01no361_i02.b1 PHD_FILE: MSMg01no361_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:34 2005
(385 letters)
>mm_chr2_48269144_48269928
Length = 785
Score = 654 bits (338), Expect = 0.0
Identities = 361/370 (97%), Gaps = 3/370 (0%)
Strand = Plus / Minus
Query: 4 ggaattctttagttatctttctgtggttaagtgtcacagaaacagcatattggactttgt 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ggaattctttagttatatttctgtggttaagtgtcacagaaacagcatattggactttgt 406
Query: 64 tacctttggctcctgaagcttaagccaaaacctagattcctggatttgggtatcattgaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tacctttggctcctgaagcttaagccaaaacctagattcctggatttgggtatcattgaa 346
Query: 124 gatacaggggccagtaagatggctcagcctctagaagtaaagtatgtgatgacctgggtt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gatacaggggccagtaagatggctcagcctctagaagtaaagtatgtgatgacctgggtt 286
Query: 184 tgattcctggaaggacaggactgattcctgaaaactgccctctaacctccactagacaca 243
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tgattcctggaaggataggactgattcctgaaaactgccctctaacctccactagacaca 226
Query: 244 tctgtgtacttccccttatgacaataataataaataaataaattttaaatttaaggaaaa 303
|||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tctgtgcacttcccctcatgacaataataataaataaataaattttaaatttaaggaaaa 166
Query: 304 aaagatccattcaaccattgggaatagaccactgaacttcatgtggtatgaatgttgtgt 363
||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 165 aaagatccatttaaccattggggatagaccactgaacttcatgtggtatgaatgttgt-- 108
Query: 364 gttttttttt 373
|||||||||
Sbjct: 107 -ttttttttt 99
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 785
Length adjustment: 9
Effective length of query: 376
Effective length of database: 776
Effective search space: 291776
Effective search space used: 291776
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no361_i02.g1 MSMg01no361_i02.g1 CHROMAT_FILE:
MSMg01no361_i02.g1 PHD_FILE: MSMg01no361_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:56:34 2005
(582 letters)
>mm_chr2_48107379_48108360
Length = 982
Score = 1106 bits (572), Expect = 0.0
Identities = 575/576 (99%)
Strand = Plus / Plus
Query: 1 agtgccctcttctgatgtgtctgaaggcagcaaaaatgtactcacatacataaaaaacat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgccctcttctgatgtgtctgaaggcagcaaaaatgtactcacatacataaaaaacat 260
Query: 61 aaataaatctttagaataaaacccaagacctaggtttcagccccaaaagtagctataaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaataaatctttagaataaaacccaagacctaggtttcagccccaaaagtagctataaga 320
Query: 121 gaaccactgtgtgggcctagaaagtgcatgctgacattaaccctcctttaaaggtccaag 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 gaaccactgtgtgggcctagaaagtgcatgctgacattaatcctcctttaaaggtccaag 380
Query: 181 gccactcagccattgaaacatgaatgagcaagcacaacagcaaatggaaatgacaacaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccactcagccattgaaacatgaatgagcaagcacaacagcaaatggaaatgacaacaca 440
Query: 241 tgtgaaattaactgggcttgcaatccaggagaagcattctttcaaaatctctgggctctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgaaattaactgggcttgcaatccaggagaagcattctttcaaaatctctgggctctc 500
Query: 301 tgtctttccttctttcttgaaaacatcagtagatccctgtgcctttaaatgacaaatcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgtctttccttctttcttgaaaacatcagtagatccctgtgcctttaaatgacaaatcaa 560
Query: 361 ccataattttctgctctaaggcaattgctctttagaattccaaatctcacccaggccaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccataattttctgctctaaggcaattgctctttagaattccaaatctcacccaggccaga 620
Query: 421 aatcaaacaattatcttgctcatttgccttcctctgctaaacagcacctgtagtatgata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatcaaacaattatcttgctcatttgccttcctctgctaaacagcacctgtagtatgata 680
Query: 481 taatactagacttagaaccccagaggccgaattgaatcagaacttatccttcttcaccgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taatactagacttagaaccccagaggccgaattgaatcagaacttatccttcttcaccgt 740
Query: 541 cgcattcatttcccatcctccacttctttttttttt 576
||||||||||||||||||||||||||||||||||||
Sbjct: 741 cgcattcatttcccatcctccacttctttttttttt 776
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
