Query= MSMg01no362_b24.b1 MSMg01no362_b24.b1 CHROMAT_FILE:
MSMg01no362_b24.b1 PHD_FILE: MSMg01no362_b24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:22 2005
(441 letters)
>mm_chr2_90846559_90847400
Length = 842
Score = 816 bits (422), Expect = 0.0
Identities = 434/438 (99%), Gaps = 1/438 (0%)
Strand = Plus / Minus
Query: 5 gaattcagaaac-caaaaactccctggttctagtagctttgagtaagtcatagaaactaa 63
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 642 gaattcagaaacacaaaaactccctggttctagtagctttgggtaagtcatagaaactaa 583
Query: 64 ctttactatataggttttttctgcatctgaatggcctaagcctgaatggtccctaagttt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 ctttactatataggttttttctgcatctgaatggcctaagcctgaatggtccctaagttt 523
Query: 124 tctttgccattttccttccccaacaggaacttaaaagacaccacacaactaaagagctaa 183
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 522 tctttgccattttccttccccaacaggaacttaaaagataccacacaactaaagagctaa 463
Query: 184 gtggcattgaccaacaacagggtcacatgatagaatcaagaaagctgagtcctgagactt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gtggcattgaccaacaacagggtcacatgatagaatcaagaaagctgagtcctgagactt 403
Query: 244 atgtcacgagcagtaacattttgacacaaatggtacccatctctcagactgaggaagctg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 atgtcacgagcagtaacattttgacacaaatggtacccatctctcagactgaggaagctg 343
Query: 304 tctgctgacctgtgcactggtgctcctctgcagcagggaagcacttacctcccattgggt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tctgctgacctgtgcactggtgctcctctgcagcagggaagcacttacctcccattgggt 283
Query: 364 ggaggctgctcagggtgttgaggttcccagaggaggcagtctgctgtaagagctgcaaat 423
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 282 ggaggctgctcagggtgttgaggttcccagaggaggcagtctgctgtaggagctgcaaat 223
Query: 424 aaagctagacattacacc 441
||||||||||||||||||
Sbjct: 222 aaagctagacattacacc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 842
Length adjustment: 9
Effective length of query: 432
Effective length of database: 833
Effective search space: 359856
Effective search space used: 359856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no362_b24.g1 MSMg01no362_b24.g1 CHROMAT_FILE:
MSMg01no362_b24.g1 PHD_FILE: MSMg01no362_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:57:22 2005
(430 letters)
>mm_chr2_90708667_90709496
Length = 830
Score = 808 bits (418), Expect = 0.0
Identities = 427/430 (99%)
Strand = Plus / Plus
Query: 1 aataccagcctacccctccgcacagcagaggacagaagtcctgtggtaaatattcttgtc 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aataccagcctacccctctgcacagcagaggacagaagtcctgtggtaaatattcttgtc 260
Query: 61 ttccatggtgtttcctgtccactgagagatgcacaaatgataagatcatgaaaagtctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttccatggtgtttcctgtccactgagagatgcacaaatgataagatcatgaaaagtctag 320
Query: 121 tagggaataaagatggctcatcaggtaaagacatctgatgtcaagcatgagttcagtctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagggaataaagatggctcatcaggtaaagacatctgatgtcaagcatgagttcagtctt 380
Query: 181 gggaccacgtgtggcatggcgtgtgctccatacgccgtacatgcacaatgaaggagtgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 381 gggaccacgtgtggcatggcgtgtgctccatacgccgtacatgcacaatgaaggaatgtt 440
Query: 241 agattagttgaaaccatatgtaaaatgtgctctccctgagctctgaaacactgcttactg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agattagttgaaaccatatgtaaaatgtgctctccctgagctctgaaacactgcttactg 500
Query: 301 ctggcggagtggtacaagcatcatggagtcacaagagggatggatagttcatatctagcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctggcggagtggtacaagcatcatggagtcacaagagggatggatagttcatatctagcc 560
Query: 361 gggcagtcattaaacatttaatgaaggcgtgacattggttttttcagtatttaagttgtg 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 gggcagtcattaaacatttaatgaaggcgtgacattggtttcttcagtatttaagttgtg 620
Query: 421 tgttcatgca 430
||||||||||
Sbjct: 621 tgttcatgca 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
