Query= MSMg01no363_d14.b1 MSMg01no363_d14.b1 CHROMAT_FILE:
MSMg01no363_d14.b1 PHD_FILE: MSMg01no363_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:52 2005
(464 letters)
>mm_chr2_172330549_172331412
Length = 864
Score = 810 bits (419), Expect = 0.0
Identities = 450/463 (97%), Gaps = 6/463 (1%)
Strand = Plus / Minus
Query: 5 gaattcagggccagtatctcccctgggagacacctgcctctccatctcaccctctgctct 64
|||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 507 gaattcagggccagcatctcccctgggagacacctgcatctccatctcaccctctgctct 448
Query: 65 cagcaggctgttccaagtctcctggggcagcaggggttggcaggggagaagctggggtat 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 447 cagcaggctgttccaagtctcctggggcagcaggggttggctggggagaagctggggtat 388
Query: 125 ttccagtgagaggcgtctcagctcctctctgcagagtgcactgtcaagcaagaaggaagg 184
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 387 ttccagtgagaggcgtctcagctcctctctgcagagtgcactgtcaagcaggaaggaagg 328
Query: 185 agctgtccttcccagccctgagtattgcccaaagcatgcaggttctctggtcctctggtt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 agctgtccttcccagccctgagtattgcccaaagcatgcaggttctctggtcctctggtt 268
Query: 245 cccacagcagggtgtggcacaaagctgttgaggtgcctccaggagcagaaaaggagactg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cccacagcagggtgtggcacaaagctgttgaggtgcctccaggagcagaaaaggagactg 208
Query: 305 tgt----gagtacaagtgtttgtacatgtgtgcctgtgtacgtgtgtatgtgtgtgtgta 360
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 tgtaagtgagtacaagtgtttgtacatgtgtgcctgtgtacgtgtgtatgtgtgtgtgta 148
Query: 361 agggtgagcgcaaccttacatgtatatgtgtgtgagtgcatgtgtgtgagtgtgtatgtg 420
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 agggtgagcgtaaccatacatgtatatgtgtgtgagtgcatgtgtgtgagtgtgtatgtg 88
Query: 421 tgtgagcttgtatgtatgtgtgtgtgagtgtgt--gtgtgtga 461
||||||||||||||||||| ||||||||||||| ||||||||
Sbjct: 87 tgtgagcttgtatgtatgtatgtgtgagtgtgtatgtgtgtga 45
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_d14.g1 MSMg01no363_d14.g1 CHROMAT_FILE:
MSMg01no363_d14.g1 PHD_FILE: MSMg01no363_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:58:52 2005
(249 letters)
>mm_chr2_172203219_172203867
Length = 649
Score = 460 bits (238), Expect = e-134
Identities = 244/246 (99%)
Strand = Plus / Plus
Query: 1 aattccaagtacatcctctcaagtggaaaagactctgtagcgaaactctgggagatttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattccaagtacatcctctcaagtggaaaagactctgtagcgaaactctgggagatttcc 260
Query: 61 acagggcggacgctggtgaggtacacaggtgcgtgagaggcgctgctggggtctcccggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagggcggacgctggtgaggtacacaggtgcgtgagaggcgctgctggggtctcccggg 320
Query: 121 gatcgcggtgctgagcaggaatgaggcactggaggaaagggattcagagaaggctctggt 180
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatcgcagtgctgagcaggaatgaggcactggaggaaagggattcagagaaggctctggc 380
Query: 181 ccatccctaggtcagcgcagatggcctcagaagagatcccagtgtccgtatgtgaagtag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccatccctaggtcagcgcagatggcctcagaagagatcccagtgtccgtatgtgaagtag 440
Query: 241 accctc 246
||||||
Sbjct: 441 accctc 446
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
