Query= MSMg01no363_f08.b1 MSMg01no363_f08.b1 CHROMAT_FILE:
MSMg01no363_f08.b1 PHD_FILE: MSMg01no363_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:00 2005
(602 letters)
>mm_chr2_78410218_78411219
Length = 1002
Score = 905 bits (468), Expect = 0.0
Identities = 508/526 (96%), Gaps = 9/526 (1%)
Strand = Plus / Minus
Query: 5 gaattcttgatcttatgtaccttgatctgagaattttgtgctcttttgtgaagacagtat 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gaattcttgatctcatgtaccttgatctgagaattttgtgctcttttgtgaagacagtat 467
Query: 65 ttacagaataaggcataatggccacatgagatcatcagctttccatacttaaaacagctg 124
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 466 ttacagaataaggcataatggccacatgagatcatcagctttctatacttaaaacagctg 407
Query: 125 tgaaaaaaataatgatttaataagagatattttaatcttacaatgatgtgtttccatatt 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 agaaaaaaataatgatttaataagagatattttaatcttacaatgatgtgtttccatatt 347
Query: 185 attttcatggaacatttcctgaatttagaaatataattaatgaattaatctactgtgatt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 attttcatggaacatttcctgaatttagaaatataattaatgaattaatctactgtgatt 287
Query: 245 tctggtattgtatcgaaggaaggtttatatcagagattgaaaatgaaataccaaacagtg 304
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 286 tctggtattgtatcgaaggaaggtttatgtcagagattgaaaatgaaataccaaacagtg 227
Query: 305 taactaacacatggttagcatt---tac------atgtagcacagtggttctcaactttc 355
|||| ||||||||||||||||| ||| ||||||||||||||||| ||||||||
Sbjct: 226 taaccaacacatggttagcattaattacttttagatgtagcacagtggttcccaactttc 167
Query: 356 ctaatgctaggaacttttaatacagattcttttgttgtagtgacctaaccataaaattat 415
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ctaatgctaggaacttttaatacagattcttttgttgtagtgacctaaccataaaattac 107
Query: 416 tttgtcattacttcataattggaattttgctactattatggatcataatataaatatctg 475
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 106 tttgtcattacttcataattggaattttgttactattatgaatcataatataaatatctg 47
Query: 476 atatgcaggatatctggggtcatgacccacaggttgagagccactg 521
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 atatgcaggatatctggggtcatgacccacaggttgagagccactg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_f08.g1 MSMg01no363_f08.g1 CHROMAT_FILE:
MSMg01no363_f08.g1 PHD_FILE: MSMg01no363_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:00 2005
(333 letters)
>mm_chr2_78269786_78270518
Length = 733
Score = 627 bits (324), Expect = 0.0
Identities = 330/332 (99%)
Strand = Plus / Plus
Query: 1 aacttatcttagaagaaagcaataaaacaaatatcactgaagatattgcttgaggctttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacttatcttagaagaaagcaataaaacaaatatcactgaagatattgcttgaggctttc 260
Query: 61 agaaaacacagagcaaggactgtctccttcaaactctcaaagatgtgagaattgactatt 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 agaaaacacagagcaaggactgtctccttcaaactctcaaaggtgtgagaattgactatt 320
Query: 121 tccatttgaggaagaagtcacagtgaccttgacaagacataacatctcagtttccccagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccatttgaggaagaagtcacagtgaccttgacaagacataacatctcagtttccccagg 380
Query: 181 agtattataagaaaagaatacaactaaaattacccaattcattgtgtgtgtgtgtgtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtattataagaaaagaatacaactaaaattacccaattcattgtgtgtgtgtgtgtttt 440
Query: 241 tactctattgaatgtcttgggaaatgctgtttcctcttccagtgtttatcaatatgcaga 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 tactctattgaatgtcttgggaaatgctgtttcctcttccagagtttatcaatatgcaga 500
Query: 301 agcatggggtggaaggaggagagaggggaagg 332
||||||||||||||||||||||||||||||||
Sbjct: 501 agcatggggtggaaggaggagagaggggaagg 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|